RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 KIF5BP33176 963 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 MCM5P33992 734 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 NUCB2P80303 420 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 PURAQ00577 322 aaKnown RBP13.29□□□□□ -0.28
CDRT1-202ENST00000354433 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 ZNF654Q8IZM8 581 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 IWS1Q96ST2 819 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 MTG1Q9BT17 334 aaPredicted RBP13.29□□□□□ -0.28
CDRT1-202ENST00000354433 SEZ6LQ9BYH1 1024 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 LIMCH1Q9UPQ0 1083 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 MRVI1Q9Y6F6 885 aa13.29□□□□□ -0.28
CDRT1-202ENST00000354433 DDAH1O94760 285 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 GH1P01241 217 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 CD4P01730 458 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 MYCLP12524 364 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 RPS6KB1P23443 525 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 CYP2C18P33260 490 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 AK2P54819 239 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 LY6KQ17RY6 165 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 RIOX1Q9H6W3 641 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 SH2B1Q9NRF2 756 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 PNMA6FA0A0J9YX94 578 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 CYTH3O43739 400 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 NR3C2P08235 984 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 ACRP10323 421 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 HSD17B4P51659 736 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 CCL23P55773 120 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 PSRC1Q6PGN9 363 aaPredicted RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 FCHSD1Q86WN1 690 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 IGDCC4Q8TDY8 1250 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 PPP1R13LQ8WUF5 828 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 NEK1Q96PY6 1258 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 TRMT13Q9NUP7 481 aaKnown RBP13.28□□□□□ -0.28
CDRT1-202ENST00000354433 MTMR10Q9NXD2 777 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
CDRT1-202ENST00000354433 SH2B2O14492 632 aaPredicted RBP13.27□□□□□ -0.29
CDRT1-202ENST00000354433 OPLAHO14841 1288 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 SUPT20HL2P0C7V6 817 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 RXRAP19793 462 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 SMAD3P84022 425 aaKnown RBP13.27□□□□□ -0.29
CDRT1-202ENST00000354433 NBR1Q14596 966 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 RAB11FIP4Q86YS3 637 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 AFG1LQ8WV93 481 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.29
CDRT1-202ENST00000354433 PDCD2LQ9BRP1 358 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 LRRC2Q9BYS8 371 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.29
CDRT1-202ENST00000354433 UMODL1Q5DID0 1318 aa13.27□□□□□ -0.29
CDRT1-202ENST00000354433 CDH23Q9H251 3354 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 A6NJR5 290 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 KPNA6O60684 536 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
CDRT1-202ENST00000354433 MMP3P08254 477 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 MTA3Q9BTC8 594 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
CDRT1-202ENST00000354433 SLC12A7Q9Y666 1083 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 MYH6P13533 1939 aa13.26□□□□□ -0.29
CDRT1-202ENST00000354433 SORBS3O60504 671 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 CYP2C9P11712 490 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 CCND2P30279 289 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 GNAQP50148 359 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 PGM5Q15124 567 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 FAM109BQ6ICB4 259 aaPredicted RBP13.25□□□□□ -0.29
CDRT1-202ENST00000354433 CCDC62Q6P9F0 684 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 SAMD3Q8N6K7 520 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 SCLYQ96I15 445 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 NOC4LQ9BVI4 516 aaKnown RBP13.25□□□□□ -0.29
CDRT1-202ENST00000354433 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
CDRT1-202ENST00000354433 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.25□□□□□ -0.29
CDRT1-202ENST00000354433 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
CDRT1-202ENST00000354433 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CALM1P0DP23 149 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CALM2P0DP24 149 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 CALM3P0DP25 149 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 GHRHRQ02643 423 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 TMEM240Q5SV17 173 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
CDRT1-202ENST00000354433 ZNF365Q70YC5 407 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms