RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 QRICH1Q2TAL8 776 aa13.41□□□□□ -0.26
SMAD9-201ENST00000350148 PLCG1P19174 1290 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 TM4SF1P30408 202 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 CACNB3P54284 484 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 DPCR1Q3MIW9 517 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 C19orf81C9J6K1 198 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 TBX3O15119 743 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 UNC13DQ70J99 1090 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 NAP1L3Q99457 506 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 NAPGQ99747 312 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 SUDS3Q9H7L9 328 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 DPEP1P16444 411 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 FKBP3Q00688 224 aaKnown RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 FAM83BQ5T0W9 1011 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 SAMD3Q8N6K7 520 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 KCPQ6ZWJ8 1503 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 UBE2SQ16763 222 aa13.4□□□□□ -0.26
SMAD9-201ENST00000350148 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
SMAD9-201ENST00000350148 ERO1AQ96HE7 468 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 MXD3Q9BW11 206 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 GUCA1BQ9UMX6 200 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 IQCA1LA6NCM1 817 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 C11orf57Q6ZUT1 292 aaPredicted RBP13.39□□□□□ -0.27
SMAD9-201ENST00000350148 JAKMIP2Q96AA8 810 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMAD9-201ENST00000350148 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 ANKS1AQ92625 1134 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 BZW2Q9Y6E2 419 aaKnown RBP13.39□□□□□ -0.27
SMAD9-201ENST00000350148 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 PSAPP07602 524 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 BIRC3Q13489 604 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 LRRC8AQ8IWT6 810 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 NOX5Q96PH1 765 aa13.39□□□□□ -0.27
SMAD9-201ENST00000350148 K7ENM7 598 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 KLRK1P26718 216 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TROAPQ12815 778 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ADAM9Q13443 819 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TFDP1Q14186 410 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 PROM2Q8N271 834 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 GLG1Q92896 1179 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ACCSQ96QU6 501 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 KIF28PB7ZC32 967 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 CHGBP05060 677 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SYCE1Q8N0S2 351 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SLC39A2Q9NP94 309 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TBC1D7Q9P0N9 293 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 FBXO2Q9UK22 296 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SFNP31947 248 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TRPC3Q13507 836 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 SEC23AQ15436 765 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 CNOT6LQ96LI5 555 aaKnown RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ZMYND12Q9H0C1 365 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 PSMD14O00487 310 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 PDHBP11177 359 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 PRELPP51888 382 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 TNNC1P63316 161 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 KRT76Q01546 638 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 LZTFL1Q9NQ48 299 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 PRDM4Q9UKN5 801 aa13.38□□□□□ -0.27
SMAD9-201ENST00000350148 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
SMAD9-201ENST00000350148 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 KLHL30Q0D2K2 578 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 KCNB1Q14721 858 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 ZNF827Q17R98 1081 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
SMAD9-201ENST00000350148 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
SMAD9-201ENST00000350148 SECISBP2LQ93073 1101 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms