RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 HACL1Q9UJ83 578 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 CTNND2Q9UQB3 1225 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 ABCB11O95342 1321 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 IGLV3-22A0A075B6J6 115 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 MYMKA6NI61 221 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 FAM86B1E9PN63 330 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 H7C1D1 291 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 WDR46O15213 610 aaKnown RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 GRIN3BO60391 1043 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 FAM86B2P0C5J1 330 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 SKILP12757 684 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 TAL1P17542 331 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 INPP5BP32019 993 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 DSG3P32926 999 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 SPAG1Q07617 926 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 MCM6Q14566 821 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 USH1GQ495M9 461 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 TBC1D10BQ4KMP7 808 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 KLHL10Q6JEL2 608 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 TTI2Q6NXR4 508 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 FOXR2Q6PJQ5 311 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 UNC13DQ70J99 1090 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 SV2BQ7L1I2 683 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 KCNK18Q7Z418 384 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 CCDC84Q86UT8 332 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 IRF2BP1Q8IU81 584 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 RASSF8Q8NHQ8 419 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 LARP4BQ92615 738 aaKnown RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 DHTKD1Q96HY7 919 aaPredicted RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 WDR18Q9BV38 432 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 ZNF341Q9BYN7 854 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 LRRC27Q9C0I9 530 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 PCDHA12Q9UN75 941 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 MRPL11Q9Y3B7 192 aaKnown RBP7.76□□□□□ -1.17
TRIM55-203ENST00000350034 ZNF536O15090 1300 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 KDM3AQ9Y4C1 1321 aa7.76□□□□□ -1.17
TRIM55-203ENST00000350034 GCOM1H8Y6P7 765 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 PSMA7O14818 248 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 ICAM1P05362 532 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 POLR2MP0CAP2 368 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 CDK11BP21127 795 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 SFPQP23246 707 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 CCNE1P24864 410 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 HOXA13P31271 388 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 HSD17B4P51659 736 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 ASIC1P78348 528 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 PDE4DQ08499 809 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 PRR16Q569H4 304 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 NBPF12Q5TAG4 269 aaPredicted RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 DCAF15Q66K64 600 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 SPECC1LQ69YQ0 1117 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 LDHDQ86WU2 507 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 APOBEC3FQ8IUX4 373 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 KCTD17Q8N5Z5 321 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 SAMD3Q8N6K7 520 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 NOC3LQ8WTT2 800 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 CLEC4DQ8WXI8 215 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 TBC1D5Q92609 795 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 GJA10Q969M2 543 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 CCDC47Q96A33 483 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 KIFC2Q96AC6 838 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 DNAJC19Q96DA6 116 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 C12orf42Q96LP6 360 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 CTAGE1Q96RT6 745 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 DUSP9Q99956 384 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 NT5C3AQ9H0P0 336 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 THAP9Q9H5L6 903 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 EXOC1Q9NV70 894 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 FBXO28Q9NVF7 368 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 GPRC5DQ9NZD1 345 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 VAV3Q9UKW4 847 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 SCAF8Q9UPN6 1271 aaKnown RBP7.75□□□□□ -1.17
TRIM55-203ENST00000350034 PPP2R3BQ9Y5P8 575 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 STK24Q9Y6E0 443 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 GJA3Q9Y6H8 435 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 ITIH6Q6UXX5 1313 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 RPTORQ8N122 1335 aa7.75□□□□□ -1.17
TRIM55-203ENST00000350034 MSH4O15457 936 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 TEX33O43247 280 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 SPATA31C1P0DKV0 1188 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 LMNB1P20700 586 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 FECHP22830 423 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CCT6AP40227 531 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 COPB1P53618 953 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 HIRAP54198 1017 aaPredicted RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 STK4Q13043 487 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 PSMD2Q13200 908 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 STIM1Q13586 685 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 KRT31Q15323 416 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 ZYXQ15942 572 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 HSP90AA4PQ58FG1 418 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 TCP11X2Q5H9J9 407 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 NOL9Q5SY16 702 aaKnown RBP7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CENPPQ6IPU0 288 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 CCDC174Q6PII3 467 aa7.74□□□□□ -1.17
TRIM55-203ENST00000350034 B3GNT9Q6UX72 402 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms