RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 LRRC14Q15048 493 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 CCDC38Q502W7 563 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 IRF2BP1Q8IU81 584 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 VGLL2Q8N8G2 317 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
PTBP1-201ENST00000349038 SPAG5Q96R06 1193 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 PANK4Q9NVE7 773 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.265e-7■■■■□ 20.4
PTBP1-201ENST00000349038 RWDD2AQ9UIY3 292 aa16.7■□□□□ 0.26
PTBP1-201ENST00000349038 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 PALMO75781 387 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■□□□ 11.4
PTBP1-201ENST00000349038 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 DYDC1Q8WWB3 177 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 EVI5O60447 810 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 DEXIO95424 95 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 KRT2P35908 639 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 FLT3P36888 993 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 ZKSCAN8Q15776 578 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-201ENST00000349038 NUP58Q9BVL2 599 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 H0Y3Z8 333 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 VEGFAP15692 232 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-201ENST00000349038 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-201ENST00000349038 ZBTB38Q8NAP3 1195 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-201ENST00000349038 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 CAPN11Q9UMQ6 739 aa16.69■□□□□ 0.26
PTBP1-201ENST00000349038 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 TNS2Q63HR2 1409 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
PTBP1-201ENST00000349038 COPB2P35606 906 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 UBA7P41226 1012 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ERFP50548 548 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 KCNJ2P63252 427 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ASIC1P78348 528 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ELF3P78545 371 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ITGB3BPQ13352 177 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-201ENST00000349038 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 IFNL3Q8IZI9 196 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 AGAP11Q8TF27 550 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 SDR42E1Q8WUS8 393 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 CUL5Q93034 780 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 FBXL5Q9UKA1 691 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 FCER1AP12319 257 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ARID4AP29374 1257 aaPredicted RBP16.68■□□□□ 0.26
PTBP1-201ENST00000349038 PDE4DQ08499 809 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 SPATS2Q86XZ4 545 aaKnown RBP16.68■□□□□ 0.26
PTBP1-201ENST00000349038 IQCKQ8N0W5 287 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 MMGT1Q8N4V1 131 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ARFGAP2Q8N6H7 521 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 TTLL11Q8NHH1 800 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 TAF4BQ92750 862 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 ARHGAP20Q9P2F6 1191 aa16.68■□□□□ 0.26
PTBP1-201ENST00000349038 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 LRRC53A6NM62 1247 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 SMIM24O75264 130 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 HSD17B3P37058 310 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 IRX1P78414 480 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 DYMQ7RTS9 669 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 SESN3P58005 492 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 CELF4Q9BZC1 486 aaKnown RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 DNM2P50570 870 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 WLSQ5T9L3 541 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 OTUD6AQ7L8S5 288 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 TLR10Q9BXR5 811 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 KRT23Q9C075 422 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
PTBP1-201ENST00000349038 TRIM33Q9UPN9 1127 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
PTBP1-201ENST00000349038 H7C1D1 291 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 ADAMTS3O15072 1205 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 DAPK3O43293 454 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 PHKA1P46020 1223 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 ZNF658Q5TYW1 1059 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-201ENST00000349038 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-201ENST00000349038 SH2D4AQ9H788 454 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
PTBP1-201ENST00000349038 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 ITGA6P23229 1130 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 SHISA4Q96DD7 197 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 AMACRQ9UHK6 382 aa16.66■□□□□ 0.26
PTBP1-201ENST00000349038 PCDH11XQ9BZA7 1347 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 PCDH11YQ9BZA8 1340 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 PCK1P35558 622 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms