RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 ICA1Q05084 483 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 NKIRAS1Q9NYS0 192 aa16.18■□□□□ 0.18
NUP50-201ENST00000347635 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 CIAPIN1Q6FI81 312 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 APBB1IPQ7Z5R6 666 aaPredicted RBP16.17■□□□□ 0.18
NUP50-201ENST00000347635 MYCT1Q8N699 235 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 MAGEA9P43362 315 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 SLC7A5Q01650 507 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 SETDB1Q15047 1291 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 IKBKGQ9Y6K9 419 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 STAT1P42224 750 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 USP14P54578 494 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
NUP50-201ENST00000347635 NNTQ13423 1086 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 PTPROQ16827 1216 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 TBCKQ8TEA7 893 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 EFCC1Q9HA90 598 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 LIMA1Q9UHB6 759 aaKnown RBP16.17■□□□□ 0.18
NUP50-201ENST00000347635 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
NUP50-201ENST00000347635 ITIH6Q6UXX5 1313 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 GGCXP38435 758 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
NUP50-201ENST00000347635 EMBQ6PCB8 327 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 CRAMP1Q96RY5 1269 aa16.17■□□□□ 0.18
NUP50-201ENST00000347635 VSNL1P62760 191 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 NFIXQ14938 502 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 PSTPIP2Q9H939 334 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 TTC26A0AVF1 554 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 MAP2K2P36507 400 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 HDAC6Q9UBN7 1215 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 KCNG1Q9UIX4 513 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 LRRC41Q15345 812 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 PARP2Q9UGN5 583 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 FHOD1Q9Y613 1164 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 FOXP4Q8IVH2 680 aaPredicted RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 TRIM7Q9C029 511 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 SLC5A4Q9NY91 659 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 STIM2Q9P246 746 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 ADD3Q9UEY8 706 aaKnown RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUP50-201ENST00000347635 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
NUP50-201ENST00000347635 BZW2Q9Y6E2 419 aaKnown RBP16.16■□□□□ 0.18
NUP50-201ENST00000347635 A0A1B0GUA9 196 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 BACH1O14867 736 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 BCRP11274 1271 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 MECOMQ03112 1051 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 DPYDQ12882 1025 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 DPH5Q9H2P9 285 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 KANSL2Q9H9L4 492 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 COL4A3BPQ9Y5P4 624 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 BUB1BO60566 1050 aaPredicted RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 PPP2R5EQ16537 467 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 RAD9BQ6WBX8 426 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 ZNF512BQ96KM6 892 aaPredicted RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 SERPINB13Q9UIV8 391 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 CAMTA2O94983 1202 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 FTCDO95954 541 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 H2AFZP0C0S5 128 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 NAA25Q14CX7 972 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 H2AFVQ71UI9 128 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 LRRC47Q8N1G4 583 aaKnown RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 AGXT2Q9BYV1 514 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 ZNF408Q9H9D4 720 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 SENP2Q9HC62 589 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 SUGT1Q9Y2Z0 365 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 A0A1W2PQC6 194 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 SERPING1P05155 500 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 FKBP3Q00688 224 aaKnown RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
NUP50-201ENST00000347635 CCDC105Q8IYK2 499 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 SLFN12Q8IYM2 578 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 UBR1Q8IWV7 1749 aa16.15■□□□□ 0.18
NUP50-201ENST00000347635 RGS16O15492 202 aaPredicted RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 ABCB4P21439 1286 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 PTPAQ15257 358 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 CCDC6Q16204 474 aa16.14■□□□□ 0.17
NUP50-201ENST00000347635 EAPPQ56P03 285 aaPredicted RBP16.14■□□□□ 0.17
NUP50-201ENST00000347635 GKAP1Q5VSY0 366 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms