RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 AAMPQ13685 434 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 KRT40Q6A162 431 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
UBE2A-201ENST00000346330 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
UBE2A-201ENST00000346330 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 BCAS3Q9H6U6 928 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 PNMA2Q9UL42 364 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 SCN5AQ14524 2016 aa12.78□□□□□ -0.36
UBE2A-201ENST00000346330 LAMA4Q16363 1823 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 CYTH3O43739 400 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 GH1P01241 217 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 CYP21A2P08686 494 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 ZNF286BP0CG31 522 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 HSD17B4P51659 736 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.37
UBE2A-201ENST00000346330 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.37
UBE2A-201ENST00000346330 TTC22Q5TAA0 569 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.37
UBE2A-201ENST00000346330 UBAC1Q9BSL1 405 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 KRT23Q9C075 422 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
UBE2A-201ENST00000346330 DDX41Q9UJV9 622 aaKnown RBP12.77□□□□□ -0.37
UBE2A-201ENST00000346330 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 PTPRSQ13332 1948 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 RAD50Q92878 1312 aa12.77□□□□□ -0.37
UBE2A-201ENST00000346330 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
UBE2A-201ENST00000346330 HIP1O00291 1037 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 KPNA6O60684 536 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 NR3C2P08235 984 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 SP2Q02086 613 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 STXBP2Q15833 593 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 PTGISQ16647 500 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 HOMER1Q86YM7 354 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 MRPL11Q9Y3B7 192 aaKnown RBP12.76□□□□□ -0.37
UBE2A-201ENST00000346330 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
UBE2A-201ENST00000346330 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
UBE2A-201ENST00000346330 LCHNA4D1U4 455 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 NBNO60934 754 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 PFKMP08237 780 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 CHMLP26374 656 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 COL4A4P53420 1690 aaPredicted RBP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 ANTXR2P58335 489 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 DEFB103AP81534 67 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 GHRHRQ02643 423 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 TFF2Q03403 129 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 PTPN11Q06124 597 aaPredicted RBP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 MBTPS1Q14703 1052 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 HSDL1Q3SXM5 330 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 CCDC178Q5BJE1 867 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 SESTD1Q86VW0 696 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 MCF2L2Q86YR7 1114 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 MICALL1Q8N3F8 863 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 NECAB3Q96P71 396 aaPredicted RBP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 PIGSQ96S52 555 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 IWS1Q96ST2 819 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 MPHOSPH6Q99547 160 aaKnown RBP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 ALG1Q9BT22 464 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE2A-201ENST00000346330 CNNM2Q9H8M5 875 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 MRVI1Q9Y6F6 885 aa12.75□□□□□ -0.37
UBE2A-201ENST00000346330 HAS3O00219 553 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 ZBTB5O15062 677 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 EIF3JO75822 258 aaKnown RBP12.74□□□□□ -0.37
UBE2A-201ENST00000346330 F2P00734 622 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 MYCLP12524 364 aaPredicted RBP12.74□□□□□ -0.37
UBE2A-201ENST00000346330 PSEN2P49810 448 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 TAP1Q03518 808 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 GRM4Q14833 912 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 TRIM71Q2Q1W2 868 aaKnown RBP12.74□□□□□ -0.37
UBE2A-201ENST00000346330 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 ASB2Q96Q27 587 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 OSBPL7Q9BZF2 842 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 THEGQ9P2T0 379 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 NOD1Q9Y239 953 aa12.74□□□□□ -0.37
UBE2A-201ENST00000346330 B4DLN1 442 aa12.73□□□□□ -0.37
UBE2A-201ENST00000346330 CKBP12277 381 aa12.73□□□□□ -0.37
UBE2A-201ENST00000346330 UBA1P22314 1058 aaKnown RBP12.73□□□□□ -0.37
UBE2A-201ENST00000346330 RFC2P35250 354 aa12.73□□□□□ -0.37
UBE2A-201ENST00000346330 NT5C2P49902 561 aa12.73□□□□□ -0.37
UBE2A-201ENST00000346330 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms