RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 DAGLBQ8NCG7 672 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 BRIP1Q9BX63 1249 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 ISCUQ9H1K1 167 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 PCDHGC5Q9Y5F6 944 aa10.68□□□□□ -0.7
HOXA1-201ENST00000343060 BAZ2AQ9UIF9 1905 aaKnown RBP10.68□□□□□ -0.7
HOXA1-201ENST00000343060 NUP98P52948 1817 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 ESYT3A0FGR9 886 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 PP2D1A8MPX8 630 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 GHRP10912 638 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SLC1A4P43007 532 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 CDR1P51861 262 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 STK4Q13043 487 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 AGBL2Q5U5Z8 902 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 FOXR2Q6PJQ5 311 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 N4BP2L2Q92802 583 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-201ENST00000343060 AK8Q96MA6 479 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
HOXA1-201ENST00000343060 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 NDST4Q9H3R1 872 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-201ENST00000343060 ATP6V0A4Q9HBG4 840 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 POLD4Q9HCU8 107 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 PCDHA4Q9UN74 947 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 MINDY4BA8MYZ0 360 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SMIM22K7EJ46 135 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 ORC4O43929 436 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 UBA7P41226 1012 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 GUCY2FP51841 1108 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 PDE4DQ08499 809 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 CRYMQ14894 314 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 HLFQ16534 295 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 MEI1Q5TIA1 1274 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 ADGRA1Q86SQ6 560 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 KIAA0895Q8NCT3 520 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SYN2Q92777 582 aaPredicted RBP10.67□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC114Q96M63 670 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 TPX2Q9ULW0 747 aaKnown RBP10.67□□□□□ -0.7
HOXA1-201ENST00000343060 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
HOXA1-201ENST00000343060 DNM1LO00429 736 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 RAD51CO43502 376 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 DNAJC8O75937 253 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 VEGFAP15692 232 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 PLCG1P19174 1290 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 HOXA7P31268 230 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 HSD17B3P37058 310 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 TNNC1P63316 161 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 CUL1Q13616 776 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 NAB2Q15742 525 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 UAP1Q16222 522 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 HELBQ8NG08 1087 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 IFT81Q8WYA0 676 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 SLIT2O94813 1529 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 GOLGA6L10A6NI86 522 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 MGRN1O60291 552 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 SCP2P22307 547 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 CYP7A1P22680 504 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 SLC8A1P32418 973 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 ZNF844Q08AG5 666 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 CHRNA2Q15822 529 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 CNNM4Q6P4Q7 775 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 RRAGAQ7L523 313 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 USP38Q8NB14 1042 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 TATDN2Q93075 761 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 LRRC45Q96CN5 670 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 FAXDC2Q96IV6 333 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 KRT12Q99456 494 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 FAM207AQ9NSI2 230 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 LEMD3Q9Y2U8 911 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 COL1A1P02452 1464 aaPredicted RBP10.66□□□□□ -0.7
HOXA1-201ENST00000343060 ATAD5Q96QE3 1844 aa10.66□□□□□ -0.7
HOXA1-201ENST00000343060 PDHBP11177 359 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 FCER1AP12319 257 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 SCTRP47872 440 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 RASSF7Q02833 373 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
HOXA1-201ENST00000343060 QPCTQ16769 361 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 CCDC178Q5BJE1 867 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 RUFY4Q6ZNE9 571 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 MAATS1Q7Z4T9 603 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 SEC16BQ96JE7 1060 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 NUCKS1Q9H1E3 243 aaKnown RBP10.65□□□□□ -0.7
HOXA1-201ENST00000343060 KIAA1551Q9HCM1 1747 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 BTNL10A8MVZ5 291 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 BUB1O43683 1085 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 PALMO75781 387 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 ERCC3P19447 782 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 ASIC1P78348 528 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 SATB1Q01826 763 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 NBPF9Q3BBW0 867 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 GALNT17Q6IS24 598 aa10.65□□□□□ -0.7
HOXA1-201ENST00000343060 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms