RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TTBK2Q6IQ55 1244 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 TRIM56Q9BRZ2 755 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 OGFRQ9NZT2 677 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 NDUFA8P51970 172 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ELF2Q15723 593 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ZNF449Q6P9G9 518 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 FANCLQ9NW38 375 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 NXF1Q9UBU9 619 aaKnown RBP16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
UBE3B-202ENST00000342494 ATF2P15336 505 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 CDKL2Q92772 493 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 CABS1Q96KC9 395 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 MEIS1O00470 390 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 RNF40O75150 1001 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 OSTNP61366 133 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 GCNAQ96QF7 691 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 DESI2Q9BSY9 194 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 PCIF1Q9H4Z3 704 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 SRGAP2BP0DMP2 458 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 ANXA13P27216 316 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 CCDC13Q8IYE1 715 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 RABEP2Q9H5N1 569 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 USP6P35125 1406 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 S100BP04271 92 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-202ENST00000342494 GARSP41250 739 aaKnown RBP16.34■□□□□ 0.21
UBE3B-202ENST00000342494 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
UBE3B-202ENST00000342494 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBE3B-202ENST00000342494 CYP21A2P08686 494 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 KRT10P13645 584 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 TRIM11Q96F44 468 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
UBE3B-202ENST00000342494 SF3A3Q12874 501 aaKnown RBP eCLIP16.33■□□□□ 0.21
UBE3B-202ENST00000342494 LSG1Q9H089 658 aaKnown RBP16.33■□□□□ 0.21
UBE3B-202ENST00000342494 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.21
UBE3B-202ENST00000342494 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.21
UBE3B-202ENST00000342494 CASQ2O14958 399 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-202ENST00000342494 MESDQ14696 234 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 C17orf53Q8N3J3 647 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-202ENST00000342494 BBOF1Q8ND07 529 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 MYL3P08590 195 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 MARK3P27448 753 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 ECE1P42892 770 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
UBE3B-202ENST00000342494 WHAMMP3Q1A5X7 153 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 FAM49AQ9H0Q0 323 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-202ENST00000342494 LMCD1Q9NZU5 365 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 AFF2P51816 1311 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 LRRC41Q15345 812 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 RSRC1Q96IZ7 334 aaKnown RBP16.33■□□□□ 0.2
UBE3B-202ENST00000342494 GDAP1L1Q96MZ0 367 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 GSDMAQ96QA5 445 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
UBE3B-202ENST00000342494 AFPP02771 609 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 CDK8P49336 464 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 FAM81BQ96LP2 452 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 GBP1P32455 592 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 COPB1P53618 953 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 NFX1Q12986 1120 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 CCNYQ8ND76 341 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 STK17AQ9UEE5 414 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 KDM5AP29375 1690 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 ABCC12Q96J65 1359 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 TCP1P17987 556 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 YWHAGP61981 247 aaKnown RBP eCLIP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 RNF207Q6ZRF8 634 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 BCAP29Q9UHQ4 241 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 CLIC2O15247 247 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 UBE2SQ16763 222 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 SIX6OS1Q8N1H7 587 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 MED7O43513 233 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 ZBTB7AO95365 584 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 PCK1P35558 622 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-202ENST00000342494 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 NLRP4Q96MN2 994 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
UBE3B-202ENST00000342494 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 GH2P01242 217 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 HOXA13P31271 388 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ARHGAP4P98171 946 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 SLC39A14Q15043 492 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ZNF589Q86UQ0 364 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-202ENST00000342494 SLC8A2Q9UPR5 921 aa16.31■□□□□ 0.2
UBE3B-202ENST00000342494 ARL4AP40617 200 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms