RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.1□□□□□ -1.75
CCDC66-202ENST00000341455 MAP3K20Q9NYL2 800 aaKnown RBP4.1□□□□□ -1.75
CCDC66-202ENST00000341455 PRKAG3Q9UGI9 489 aa4.1□□□□□ -1.75
CCDC66-202ENST00000341455 PPME1Q9Y570 386 aa4.1□□□□□ -1.75
CCDC66-202ENST00000341455 SNX14Q9Y5W7 946 aa4.1□□□□□ -1.75
CCDC66-202ENST00000341455 KIAA1217Q5T5P2 1943 aa4.1□□□□□ -1.75
CCDC66-202ENST00000341455 TCP10L2B9ZVM9 353 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 TTLL1O95922 423 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 USP5P45974 858 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 GRM4Q14833 912 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 SLC4A8Q2Y0W8 1093 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CCDC144BQ3MJ40 725 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 RNF20Q5VTR2 975 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 MIGA1Q8NAN2 632 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ZNF280CQ8ND82 737 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 C1orf216Q8TAB5 229 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 FAM174AQ8TBP5 190 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 SDR42E1Q8WUS8 393 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ESR2Q92731 530 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 HLA-CQ95604 372 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 USB1Q9BQ65 265 aaKnown RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 LZTS2Q9BRK4 669 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 TINF2Q9BSI4 451 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 RANBP17Q9H2T7 1088 aaKnown RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 VCPKMTQ9H867 229 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 LY9Q9HBG7 655 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 PRKAG2Q9UGJ0 569 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 EGFL7Q9UHF1 273 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CLRN2A0PK11 232 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 UBE2Q2LH0YL09 131 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 DNM1LO00429 736 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 LZTS3O60299 673 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CNMDO75829 334 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CALM1P0DP23 149 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CALM2P0DP24 149 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CALM3P0DP25 149 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 SLURP2P0DP57 97 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CYP2D6P10635 497 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 TOP1P11387 765 aaKnown RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 FUT2Q10981 343 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ABCB5Q2M3G0 1257 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CERKLQ49MI3 558 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 EGFLAMQ63HQ2 1017 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 CATSPERGQ6ZRH7 1159 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 FAM160B2Q86V87 743 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 NT5DC4Q86YG4 428 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ZNF274Q96GC6 653 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ZSCAN10Q96SZ4 725 aaPredicted RBP4.09□□□□□ -1.75
CCDC66-202ENST00000341455 SPZ1Q9BXG8 430 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 BCL11AQ9H165 835 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 MCM9Q9NXL9 1143 aa4.09□□□□□ -1.75
CCDC66-202ENST00000341455 ZNF213O14771 459 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ICMTO60725 284 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 AKR1B1P15121 316 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 RPS6KB1P23443 525 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 RAB30Q15771 203 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ECM1Q16610 540 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 SWI5Q1ZZU3 235 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 CCDC96Q2M329 555 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 SLFNL1Q499Z3 407 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ASPRV1Q53RT3 343 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 OLFML2BQ68BL8 750 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 CWC27Q6UX04 472 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 CCDC129Q6ZRS4 1044 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ANKMY2Q8IV38 441 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 LOXHD1Q8IVV2 1947 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 MSL3Q8N5Y2 521 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 NCOA7Q8NI08 942 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 HERVK_113Q902F9 699 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 SNX21Q969T3 373 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 TSEN34Q9BSV6 310 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 RIOX1Q9H6W3 641 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 DCTN4Q9UJW0 460 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 FEM1BQ9UK73 627 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 JAG2Q9Y219 1238 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 WASF2Q9Y6W5 498 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 F8W031 263 aaPredicted RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ARHGEF15O94989 841 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 BMP1P13497 986 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 VARSP26640 1264 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 PSMA5P28066 241 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 TROAPQ12815 778 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 PABPC4Q13310 644 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 TAF1CQ15572 869 aaPredicted RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 TMEM31Q5JXX7 168 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 GPATCH4Q5T3I0 446 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 MFSD6Q6ZSS7 791 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 RUFY3Q7L099 469 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 DHX32Q7L7V1 743 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 GLYCTKQ8IVS8 523 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ENAHQ8N8S7 591 aaPredicted RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 RILPL2Q969X0 211 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 OPTNQ96CV9 577 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 WRNIP1Q96S55 665 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ARHGEF10LQ9HCE6 1279 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 DIS3Q9Y2L1 958 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 CSADQ9Y600 493 aa4.08□□□□□ -1.76
CCDC66-202ENST00000341455 ZNFX1Q9P2E3 1918 aaKnown RBP4.08□□□□□ -1.76
CCDC66-202ENST00000341455 PFASO15067 1338 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms