RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PACS2Q86VP3 889 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.5
TPM3-207ENST00000341372 FRMPD2Q68DX3 1309 aaPredicted RBP11.95□□□□□ -0.5
TPM3-207ENST00000341372 NAA30Q147X3 362 aaPredicted RBP11.95□□□□□ -0.5
TPM3-207ENST00000341372 SART3Q15020 963 aaKnown RBP11.95□□□□□ -0.5
TPM3-207ENST00000341372 MTFR1Q15390 333 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 TPCN2Q8NHX9 752 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 IGDCC4Q8TDY8 1250 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 RAVER2Q9HCJ3 691 aaKnown RBP11.95□□□□□ -0.5
TPM3-207ENST00000341372 MAP10Q9P2G4 905 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 RIPK3Q9Y572 518 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 PCDHB9Q9Y5E1 797 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
TPM3-207ENST00000341372 IFIT3O14879 490 aaKnown RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 REC8O95072 547 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 NUDT7P0C024 238 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 FCER1AP12319 257 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 SOX10P56693 466 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 ANAPC15P60006 121 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 ARID5AQ03989 594 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 IKQ13123 557 aaPredicted RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 COL9A3Q14050 684 aaPredicted RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 CCDC181Q5TID7 509 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CHST13Q8NET6 341 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
TPM3-207ENST00000341372 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 WDR19Q8NEZ3 1342 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 BRCA2P51587 3418 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 COBLO75128 1261 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CLSTN1O94985 981 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CCL5P13501 91 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 MCM5P33992 734 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 HSPA4P34932 840 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 SLC16A2P36021 539 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 WTAPQ15007 396 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CCL14Q16627 93 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 TKFCQ3LXA3 575 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 SWT1Q5T5J6 900 aaKnown RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 OLFML2BQ68BL8 750 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CPXCR1Q8N123 301 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 HELQQ8TDG4 1101 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 MMP19Q99542 508 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 PAK6Q9NQU5 681 aaPredicted RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 CTDP1Q9Y5B0 961 aaPredicted RBP11.94□□□□□ -0.5
TPM3-207ENST00000341372 LCTP09848 1927 aa11.94□□□□□ -0.5
TPM3-207ENST00000341372 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 DNAJC25-GNG10A0A024R161 153 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 ERICH2A1L162 156 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
TPM3-207ENST00000341372 PRC1O43663 620 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
TPM3-207ENST00000341372 ICAM1P05362 532 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 IBSPP21815 317 aaPredicted RBP11.93□□□□□ -0.5
TPM3-207ENST00000341372 WEE1P30291 646 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 TROAPQ12815 778 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 HINFPQ9BQA5 517 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 FLRT1Q9NZU1 646 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 DIS3Q9Y2L1 958 aaKnown RBP11.93□□□□□ -0.5
TPM3-207ENST00000341372 MYH6P13533 1939 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 GJB1P08034 283 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 PARP1P09874 1014 aaKnown RBP11.93□□□□□ -0.5
TPM3-207ENST00000341372 NPR3P17342 541 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 TRIM32Q13049 653 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 PSMD2Q13200 908 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 KRT32Q14532 448 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 KCTD2Q14681 263 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 GRM4Q14833 912 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
TPM3-207ENST00000341372 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 CAPN2P17655 700 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 LIFRP42702 1097 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 EHHADHQ08426 723 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 ZNF394Q53GI3 561 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 DPP9Q86TI2 863 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 MCF2L2Q86YR7 1114 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 MAML3Q96JK9 1138 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 ACAD9Q9H845 621 aa11.92□□□□□ -0.5
TPM3-207ENST00000341372 RNF146Q9NTX7 359 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms