RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 GH1P01241 217 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 MMP3P08254 477 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 MYOGP15173 224 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 RXRAP19793 462 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 RABGGTBP53611 331 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 PDCD2LQ9BRP1 358 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 ESYT1Q9BSJ8 1104 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 LY9Q9HBG7 655 aa15.52■□□□□ 0.08
NUDCD3-201ENST00000338427 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 PRC1O43663 620 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 BRDTQ58F21 947 aaPredicted RBP15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 GDF6Q6KF10 455 aaPredicted RBP15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 CATIPQ7Z7H3 387 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 VSIG10LQ86VR7 867 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 TIFAQ96CG3 184 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 ALG1Q9BT22 464 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 ZNF576Q9H609 170 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 TELO2Q9Y4R8 837 aa15.51■□□□□ 0.07
NUDCD3-201ENST00000338427 EYSQ5T1H1 3165 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 hCG_1642624A0A1W2PR95 340 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 GCOM1H8Y6P7 765 aaPredicted RBP15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 KPNA6O60684 536 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 PLEKHA8P1O95397 391 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 POLR2MP0CAP2 368 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 GHRHRQ02643 423 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 PGM5Q15124 567 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 NECTIN1Q15223 517 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 CREB3L3Q68CJ9 461 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 PSRC1Q6PGN9 363 aaPredicted RBP15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 SRBD1Q8N5C6 995 aaKnown RBP15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 RTEL1Q9NZ71 1219 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 YBX2Q9Y2T7 364 aaKnown RBP15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 MRVI1Q9Y6F6 885 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 MYH7BA7E2Y1 1941 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 SCN5AQ14524 2016 aa15.5■□□□□ 0.07
NUDCD3-201ENST00000338427 SCN10AQ9Y5Y9 1956 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 ZBBXA8MT70 800 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 SUPT20HL2P0C7V6 817 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 HIC1Q14526 733 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 GPNMBQ14956 572 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 RPUSD2Q8IZ73 545 aaKnown RBP15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 CCDC82Q8N4S0 544 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 MAFAQ8NHW3 353 aaPredicted RBP15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 SEZ6LQ9BYH1 1024 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 MAF1Q9H063 256 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 MYO9BQ13459 2157 aa15.49■□□□□ 0.07
NUDCD3-201ENST00000338427 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 SH2B2O14492 632 aaPredicted RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 IQCF3P0C7M6 154 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 ZNF286BP0CG31 522 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 FOSL2P15408 326 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 CASTP20810 708 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PSEN2P49810 448 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 MRPS9P82933 396 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 SART3Q15020 963 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PTGISQ16647 500 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 MYSM1Q5VVJ2 828 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 NFXL1Q6ZNB6 911 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 USP38Q8NB14 1042 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PPM1EQ8WY54 764 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PRDM12Q9H4Q4 367 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 ANO2Q9NQ90 1003 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PRDM6Q9NQX0 595 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 KIAA1217Q5T5P2 1943 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 PRUNE2Q8WUY3 3088 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
NUDCD3-201ENST00000338427 GGPS1O95749 300 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 LAMC2Q13753 1193 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 DGKDQ16760 1214 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 TCTN1Q2MV58 587 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 CELF3Q5SZQ8 465 aaKnown RBP15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 CASC1Q6TDU7 716 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 RETREG2Q8NC44 543 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 WNT8BQ93098 351 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 TCEANC2Q96MN5 208 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 SLC4A7Q9Y6M7 1214 aa15.47■□□□□ 0.07
NUDCD3-201ENST00000338427 UNC80Q8N2C7 3258 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 TET1Q8NFU7 2136 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 MCM5P33992 734 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 PTPN11Q06124 597 aaPredicted RBP15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 SEMA3FQ13275 785 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 ADGRE1Q14246 886 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 CTCFLQ8NI51 663 aaPredicted RBP15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 SPATA33Q96N06 139 aa15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 MAP3K20Q9NYL2 800 aaKnown RBP15.46■□□□□ 0.07
NUDCD3-201ENST00000338427 MSRAQ9UJ68 235 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms