RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 PEX19P40855 299 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 MAPK4P31152 587 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 OTUB1Q96FW1 271 aaPredicted RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 DRP2Q13474 957 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 NCLNQ969V3 563 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 M0R2C6 588 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 POLR2FP61218 127 aaKnown RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 SKIP12755 728 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 NEK8Q86SG6 692 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 SLC7A5P2Q9GIP4 190 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
RERE-201ENST00000337907 ZNF532Q9HCE3 1301 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
RERE-201ENST00000337907 KRT87PA6NCN2 255 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 TOM1L1O75674 476 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 MAP3K10Q02779 954 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 ADAM9Q13443 819 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 ADALQ6DHV7 355 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 ARMCX2Q7L311 632 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 ABCF3Q9NUQ8 709 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 DUOX2Q9NRD8 1548 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 HNRNPDLO14979 420 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 HLA-DPA1P20036 260 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 HACD3Q9P035 362 aa13.77□□□□□ -0.2
RERE-201ENST00000337907 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.2
RERE-201ENST00000337907 LAD1O00515 517 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 GAP43P17677 238 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 KRT40Q6A162 431 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 RPAINQ86UA6 219 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 SIX6OS1Q8N1H7 587 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 BCAS4Q8TDM0 211 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 MED21Q13503 144 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 KCTD2Q14681 263 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 H2AFZP0C0S5 128 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 SKOR1P84550 965 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 WASHC5Q12768 1159 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 H2AFVQ71UI9 128 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 PLA2G4DQ86XP0 818 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 ABTB1Q969K4 478 aaPredicted RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 NAF1Q96HR8 494 aaKnown RBP13.77□□□□□ -0.21
RERE-201ENST00000337907 PPARAQ07869 468 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
RERE-201ENST00000337907 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 SNX2O60749 519 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 KRT4P19013 534 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 FLAD1Q8NFF5 587 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 IPO5O00410 1097 aaKnown RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 CCND2P30279 289 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 RECQLP46063 649 aaPredicted RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 C16orf87Q6PH81 154 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 SURF1Q15526 300 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 GRAMD4Q6IC98 578 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 IQANK1A0A1B0GTG1 560 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 ZNF18P17022 549 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 TAF1BQ53T94 588 aaPredicted RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
RERE-201ENST00000337907 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 HPCAL4Q9UM19 191 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 L3MBTL1Q9Y468 752 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 KIAA0586Q9BVV6 1533 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 A0A1B0GW55 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 PRDM1O75626 825 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L2P0CJ85 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L3P0CJ86 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L4P0CJ87 422 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L5P0CJ88 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L6P0CJ89 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 DUX4L7P0CJ90 424 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
RERE-201ENST00000337907 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms