RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 A6NJR5 290 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 KPNA6O60684 536 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
MRPL55-203ENST00000336520 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
MRPL55-203ENST00000336520 LY6KQ17RY6 165 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 Q6ZUG5 572 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 FAM126BQ8IXS8 530 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 BRF1Q92994 677 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 MTG1Q9BT17 334 aaPredicted RBP13.08□□□□□ -0.32
MRPL55-203ENST00000336520 SEZ6LQ9BYH1 1024 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
MRPL55-203ENST00000336520 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
MRPL55-203ENST00000336520 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 ITGB8P26012 769 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 CHMP4BP1P59074 171 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 FPGSQ05932 587 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 FAM47CQ5HY64 1035 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 KCNV1Q6PIU1 500 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 SLC43A3Q8NBI5 491 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 GPKOWQ92917 476 aaPredicted RBP eCLIP13.07□□□□□ -0.32
MRPL55-203ENST00000336520 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
MRPL55-203ENST00000336520 GRIN2DO15399 1336 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
MRPL55-203ENST00000336520 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 PIK3CDO00329 1044 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-203ENST00000336520 TIMP1P01033 207 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
MRPL55-203ENST00000336520 RCAN1P53805 252 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 LAMC2Q13753 1193 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
MRPL55-203ENST00000336520 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-203ENST00000336520 PPP1R12CQ9BZL4 782 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
MRPL55-203ENST00000336520 MEIS2O14770 477 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 SORBS3O60504 671 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 RGS20O76081 388 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 CD4P01730 458 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 MMP3P08254 477 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 NAPAP54920 295 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 DGKDQ16760 1214 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 GNPTABQ3T906 1256 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 WWC2Q6AWC2 1192 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 EMID1Q96A84 441 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-203ENST00000336520 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-203ENST00000336520 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-203ENST00000336520 FRMPD4Q14CM0 1322 aa13.05□□□□□ -0.32
MRPL55-203ENST00000336520 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 B4GALT4O60513 344 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 STAM2O75886 525 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 GGPS1O95749 300 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 TGFB3P10600 412 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 UBA1P22314 1058 aaKnown RBP13.04□□□□□ -0.32
MRPL55-203ENST00000336520 CDC27P30260 824 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 FUT2Q10981 343 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 SHHQ15465 462 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 UBE2SQ16763 222 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 SPATA33Q96N06 139 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 HIPK3Q9H422 1215 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 EHMT1Q9H9B1 1298 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-203ENST00000336520 RTEL1Q9NZ71 1219 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 CYP46A1Q9Y6A2 500 aa13.04□□□□□ -0.32
MRPL55-203ENST00000336520 hCG_1984214I3L0E3 225 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 CYP2C18P33260 490 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 ADD1P35611 737 aaKnown RBP13.03□□□□□ -0.32
MRPL55-203ENST00000336520 ADCY7P51828 1080 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 EPHB4P54760 987 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
MRPL55-203ENST00000336520 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.326e-7■■■■□ 20.4
MRPL55-203ENST00000336520 CELF3Q5SZQ8 465 aaKnown RBP13.03□□□□□ -0.32
MRPL55-203ENST00000336520 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 NFRKBQ6P4R8 1299 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 ZNF713Q8N859 430 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-203ENST00000336520 PPP1R13LQ8WUF5 828 aa13.03□□□□□ -0.32
MRPL55-203ENST00000336520 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms