RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 TRIM58Q8NG06 486 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 CEP89Q96ST8 783 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 TSG101Q99816 390 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 RAB34Q9BZG1 259 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 PDE2AO00408 941 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 KRT18P05783 430 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 RASA1P20936 1047 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 KIF11P52732 1056 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 SARNPP82979 210 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 EFCAB13Q8IY85 973 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 CUEDC2Q9H467 287 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 KANSL2Q9H9L4 492 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 PCDHA13Q9Y5I0 950 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
CDC42EP4-201ENST00000335793 ITGB4P16144 1822 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 GOLGA6BA6NDN3 693 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 RASSF7Q02833 373 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 WDR93Q6P2C0 686 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 NELFCDQ8IXH7 590 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 GJA10Q969M2 543 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 RPGRIP1Q96KN7 1286 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 SELENOOQ9BVL4 669 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 EHD2Q9NZN4 543 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 DUOX1Q9NRD9 1551 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 USP17L5A8MUK1 530 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 RFC4P35249 363 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 CCT5P48643 541 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 VWA3BQ502W6 1294 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 SWT1Q5T5J6 900 aaKnown RBP18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 LARP4BQ92615 738 aaKnown RBP18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 LZTS2Q9BRK4 669 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 TSGA10Q9BZW7 698 aa18.27■□□□□ 0.52
CDC42EP4-201ENST00000335793 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 NCK2O43639 380 aa18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 NFRKBQ6P4R8 1299 aa18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 N4BP2L2Q92802 583 aaPredicted RBP18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 PSD3Q9NYI0 1048 aa18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 CAPN6Q9Y6Q1 641 aa18.27■□□□□ 0.51
CDC42EP4-201ENST00000335793 PALM3A6NDB9 673 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 TDP2O95551 362 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 PAPD7Q5XG87 772 aaKnown RBP18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 COG1Q8WTW3 980 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 ZMYND12Q9H0C1 365 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 TAF1P21675 1872 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 MYMKA6NI61 221 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 LRRC53A6NM62 1247 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 C6orf229H3BNL8 230 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 UFL1O94874 794 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 KIAA0895Q8NCT3 520 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 TIAM2Q8IVF5 1701 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 MYH13Q9UKX3 1938 aa18.26■□□□□ 0.51
CDC42EP4-201ENST00000335793 GOLGA6CA6NDK9 693 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 GOLGA6DP0CG33 693 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 MYBL2P10244 700 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 PRPHP41219 470 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 CLEC10AQ8IUN9 316 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 IFT81Q8WYA0 676 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 LRRC1Q9BTT6 524 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 GOLGA6AQ9NYA3 693 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 SH3BP1Q9Y3L3 701 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 EPHB6O15197 1021 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 PPARDQ03181 441 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 GRIPAP1Q4V328 841 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 FAM76AQ8TAV0 307 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 C7orf25Q9BPX7 421 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 A0A087WUV0 522 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 GFPT1Q06210 699 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 HDAC7Q8WUI4 952 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 HPCAL4Q9UM19 191 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 DISP2A7MBM2 1401 aa18.25■□□□□ 0.51
CDC42EP4-201ENST00000335793 PPP1R12AO14974 1030 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 PPP1R2P41236 205 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 MEA1Q16626 185 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 UBE2SQ16763 222 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 MAGEF1Q9HAY2 307 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 ARHGAP20Q9P2F6 1191 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 ROBO1Q9Y6N7 1651 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 SHANK3Q9BYB0 1731 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 PTPROQ16827 1216 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 CCNI2Q6ZMN8 369 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
CDC42EP4-201ENST00000335793 DDX12PQ92771 950 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms