RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 MROH8Q9H579 483 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 TMEM63CQ9P1W3 806 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
TRIM49B-201ENST00000332682 PLXNB2O15031 1838 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 NDUFA8P51970 172 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 CCNA1P78396 465 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 GRM1Q13255 1194 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 SNW1Q13573 536 aaKnown RBP13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 TAF1CQ15572 869 aaPredicted RBP13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 CEP55Q53EZ4 464 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 DTHD1Q6ZMT9 781 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 USP49Q70CQ1 688 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 EFCC1Q9HA90 598 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 ASTN1O14525 1302 aa13.68□□□□□ -0.22
TRIM49B-201ENST00000332682 TBX3O15119 743 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 ITGB5P18084 799 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 ZNF76P36508 570 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 TM4SF4P48230 202 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 NOGQ13253 232 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 FMR1NBQ8N0W7 255 aaPredicted RBP13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 ZNFX1Q9P2E3 1918 aaKnown RBP13.67□□□□□ -0.22
TRIM49B-201ENST00000332682 MEIS1O00470 390 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 MSH4O15457 936 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 BCRP11274 1271 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 TXKP42681 527 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 KCTD2Q14681 263 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 WDR78Q5VTH9 848 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 XRRA1Q6P2D8 792 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM133AQ8N9E0 248 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 DNERQ8NFT8 737 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 GJA10Q969M2 543 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 CAPNS2Q96L46 248 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 MMP19Q99542 508 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 CPA4Q9UI42 421 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 UBIAD1Q9Y5Z9 338 aa13.66□□□□□ -0.22
TRIM49B-201ENST00000332682 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 TLR2O60603 784 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 NR3C2P08235 984 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 FCER1AP12319 257 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 TECP42680 631 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 NIPA1Q7RTP0 329 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 VSIG10LQ86VR7 867 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 SLFN12Q8IYM2 578 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
TRIM49B-201ENST00000332682 A0A087X0B3 334 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 AOC2O75106 756 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 PGK2P07205 417 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 CCND2P30279 289 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 CDC25AP30304 524 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 SYKP43405 635 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ALDH5A1P51649 535 aaPredicted RBP13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 FGD4Q96M96 766 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 AK8Q96MA6 479 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 FAM20AQ96MK3 541 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 GZF1Q9H116 711 aaPredicted RBP13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 PLXNA1Q9UIW2 1896 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 POTEMA6NI47 508 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 MARCH6O60337 910 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ZNF202O95125 648 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ARP10275 920 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 EDNRBP24530 442 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 SPIRE1Q08AE8 756 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 CRHR2Q13324 411 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 C17orf99Q6UX52 265 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
TRIM49B-201ENST00000332682 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms