RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 EDIL3O43854 480 aa18.32■□□□□ 0.52
LRRC28-202ENST00000331450 EIF3JO75822 258 aaKnown RBP18.32■□□□□ 0.52
LRRC28-202ENST00000331450 STAM2O75886 525 aa18.32■□□□□ 0.52
LRRC28-202ENST00000331450 CYP3A4P08684 503 aa18.32■□□□□ 0.52
LRRC28-202ENST00000331450 MYCLP12524 364 aaPredicted RBP18.32■□□□□ 0.52
LRRC28-202ENST00000331450 CCND3P30281 292 aaPredicted RBP18.32■□□□□ 0.52
LRRC28-202ENST00000331450 MTFR1Q15390 333 aa18.32■□□□□ 0.52
LRRC28-202ENST00000331450 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
LRRC28-202ENST00000331450 INPP4AQ96PE3 977 aaPredicted RBP18.32■□□□□ 0.52
LRRC28-202ENST00000331450 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
LRRC28-202ENST00000331450 CENPFP49454 3210 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 FAM205CA6NFA0 338 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 KIF28PB7ZC32 967 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 PDCP20941 246 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 NONOQ15233 471 aaKnown RBP eCLIP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 SAFBQ15424 915 aaKnown RBP eCLIP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 LARP1BQ659C4 914 aaKnown RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 EEPD1Q7L9B9 569 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 TBCKQ8TEA7 893 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 HMX1Q9NP08 348 aaPredicted RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
LRRC28-202ENST00000331450 UBIAD1Q9Y5Z9 338 aa18.31■□□□□ 0.52
LRRC28-202ENST00000331450 CCDC194A0A1B0GVG4 234 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 SEPT4O43236 478 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 ADCY6O43306 1168 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 CCL5P13501 91 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 ITGB5P18084 799 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 SYT1P21579 422 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.521e-8■■■■■ 33
LRRC28-202ENST00000331450 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 ZFP91Q96JP5 570 aaPredicted RBP18.3■□□□□ 0.52
LRRC28-202ENST00000331450 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.3■□□□□ 0.52
LRRC28-202ENST00000331450 PDGFCQ9NRA1 345 aa18.3■□□□□ 0.52
LRRC28-202ENST00000331450 AKR1A1P14550 325 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 CIITAP33076 1130 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 ADCYAP1R1P41586 468 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 INF2Q27J81 1249 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 CCDC62Q6P9F0 684 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
LRRC28-202ENST00000331450 IGLV3-22A0A075B6J6 115 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
LRRC28-202ENST00000331450 FAM86B1E9PN63 330 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 H3BQV1 296 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 ARIH2O95376 493 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 FAM86B2P0C5J1 330 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 ICAM3P32942 547 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 USP11P51784 963 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 SEMA3FQ13275 785 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 IQSEC1Q6DN90 963 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 MOXD1Q6UVY6 613 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 NIPA1Q7RTP0 329 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 GPRASP2Q96D09 838 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 MBOAT7Q96N66 472 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 MXRA8Q9BRK3 442 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
LRRC28-202ENST00000331450 MEIS1O00470 390 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 FIBPO43427 364 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 ANP32AP39687 249 aaKnown RBP18.27■□□□□ 0.52
LRRC28-202ENST00000331450 GNPTABQ3T906 1256 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 CEP55Q53EZ4 464 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 TMEM63BQ5T3F8 832 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 SEPT14Q6ZU15 432 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 NEK8Q86SG6 692 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 CYP2W1Q8TAV3 490 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 LENG9Q96B70 501 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 JADE2Q9NQC1 790 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.52
LRRC28-202ENST00000331450 FAM184BQ9ULE4 1060 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
LRRC28-202ENST00000331450 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
LRRC28-202ENST00000331450 WDR81Q562E7 1941 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
LRRC28-202ENST00000331450 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 STX6O43752 255 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 MSCO60682 206 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 SMPD1P17405 629 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 CYP3A7P24462 503 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 CNGA1P29973 690 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 DUSP28Q4G0W2 176 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 LHX8Q68G74 356 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 LENG1Q96BZ8 264 aaPredicted RBP18.26■□□□□ 0.51
LRRC28-202ENST00000331450 RNF208Q9H0X6 261 aa18.26■□□□□ 0.51
LRRC28-202ENST00000331450 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
LRRC28-202ENST00000331450 WNT7AO00755 349 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 DUSP11O75319 330 aaKnown RBP18.25■□□□□ 0.51
LRRC28-202ENST00000331450 TDP2O95551 362 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 MYCP01106 439 aaPredicted RBP18.25■□□□□ 0.51
LRRC28-202ENST00000331450 GJB1P08034 283 aa18.25■□□□□ 0.51
LRRC28-202ENST00000331450 TGFB3P10600 412 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms