RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 FAM173BQ6P4H8 233 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 NCAPG2Q86XI2 1143 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
C11orf54-201ENST00000331239 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 FAM133AQ8N9E0 248 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 TBCKQ8TEA7 893 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 MMP19Q99542 508 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
C11orf54-201ENST00000331239 RIPK3Q9Y572 518 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
C11orf54-201ENST00000331239 NFIBO00712 420 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 HOXC6P09630 235 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 PTPREP23469 700 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 VEGFBP49765 207 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 C1QTNF8P60827 252 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 ARHGAP4P98171 946 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 GRB14Q14449 540 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 Q3C1V9 767 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 USP17L6PQ6QN14 398 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 SOCS4Q8WXH5 440 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 SPATA32Q96LK8 384 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 FAM20AQ96MK3 541 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 MGAMO43451 1857 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 EDNRBP24530 442 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 CCND2P30279 289 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 PRMT2P55345 433 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 ATP2C1P98194 919 aaPredicted RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 SLFN12Q8IYM2 578 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 ANKRD13CQ8N6S4 541 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 LINC00301Q8NCQ3 95 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 NRBP1Q9UHY1 535 aa10.75□□□□□ -0.69
C11orf54-201ENST00000331239 R3HCC1Q9Y3T6 440 aaKnown RBP10.75□□□□□ -0.69
C11orf54-201ENST00000331239 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 LIG1P18858 919 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 BRD2P25440 801 aaKnown RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 CRHR2Q13324 411 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 PTPAQ15257 358 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 MAMDC4Q6UXC1 1216 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 LEO1Q8WVC0 666 aaPredicted RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 GPRASP2Q96D09 838 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 RMDN3Q96TC7 470 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 PYM1Q9BRP8 204 aaKnown RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 A0A1W2PQ27 194 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 A0A1W2PQ64 194 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 A0A1W2PQD8 194 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 MEIS1O00470 390 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 EIF3JO75822 258 aaKnown RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 PDIA5Q14554 519 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 KIF22Q14807 665 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 INF2Q27J81 1249 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 MORN1Q5T089 497 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 ARHGEF16Q5VV41 709 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 NSMFQ6X4W1 530 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 NLRX1Q86UT6 975 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 DHX37Q8IY37 1157 aaKnown RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 AK8Q96MA6 479 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 PDCD2LQ9BRP1 358 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 DDX19AQ9NUU7 478 aaKnown RBP10.74□□□□□ -0.69
C11orf54-201ENST00000331239 UBIAD1Q9Y5Z9 338 aa10.74□□□□□ -0.69
C11orf54-201ENST00000331239 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 PLXNA1Q9UIW2 1896 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 SPTLC2O15270 562 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 RRP9O43818 475 aaKnown RBP10.73□□□□□ -0.69
C11orf54-201ENST00000331239 CUTAO60888 179 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 TGFB3P10600 412 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 XRCC5P13010 732 aaKnown RBP10.73□□□□□ -0.69
C11orf54-201ENST00000331239 HOXD10P28358 340 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 ICAM3P32942 547 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 FOSBP53539 338 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 FCGRTP55899 365 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 STK38Q15208 465 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 UBE2SQ16763 222 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 ZNF792Q3KQV3 632 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 CEP55Q53EZ4 464 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 GPR142Q7Z601 462 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 GIMAP8Q8ND71 665 aaPredicted RBP10.73□□□□□ -0.69
C11orf54-201ENST00000331239 USP6NLQ92738 828 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 TMEM260Q9NX78 707 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 SRPRBQ9Y5M8 271 aaKnown RBP10.73□□□□□ -0.69
C11orf54-201ENST00000331239 LCTP09848 1927 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 SYNGAP1Q96PV0 1343 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 PGM5Q15124 567 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 SF3A1Q15459 793 aaKnown RBP10.73□□□□□ -0.69
C11orf54-201ENST00000331239 STXBP2Q15833 593 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 GNPTABQ3T906 1256 aa10.73□□□□□ -0.69
C11orf54-201ENST00000331239 OLFML2BQ68BL8 750 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms