RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.32
BRCC3-201ENST00000330045 USP17L5A8MUK1 530 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 TMEM266Q2M3C6 531 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 C2CD5Q86YS7 1000 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 ARHGAP20Q9P2F6 1191 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 PDE2AO00408 941 aaPredicted RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 FGFR1OPO95684 399 aaKnown RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 PLCG2P16885 1265 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 AARSP49588 968 aaKnown RBP eCLIP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 MAN2A1Q16706 1144 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 IQCEQ6IPM2 695 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 IFIH1Q9BYX4 1025 aaKnown RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 FAM207AQ9NSI2 230 aaPredicted RBP17.07■□□□□ 0.32
BRCC3-201ENST00000330045 JRKLQ9Y4A0 524 aa17.07■□□□□ 0.32
BRCC3-201ENST00000330045 hCG_1984214I3L0E3 225 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 TACC1O75410 805 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 BBOX1O75936 387 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 NOVP48745 357 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
BRCC3-201ENST00000330045 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
BRCC3-201ENST00000330045 ZNF713Q8N859 430 aaPredicted RBP17.06■□□□□ 0.32
BRCC3-201ENST00000330045 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 MMRN2Q9H8L6 949 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 PCDHA13Q9Y5I0 950 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 ABCB11O95342 1321 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 EPHB6O15197 1021 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
BRCC3-201ENST00000330045 RAB34Q9BZG1 259 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
BRCC3-201ENST00000330045 HPCAL4Q9UM19 191 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 SNX12Q9UMY4 172 aa17.06■□□□□ 0.32
BRCC3-201ENST00000330045 COL11A2P13942 1736 aaPredicted RBP17.05■□□□□ 0.32
BRCC3-201ENST00000330045 SLC37A4O43826 429 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 ZMYND10O75800 440 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 PDHBP11177 359 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 KIF11P52732 1056 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 RHBDL3P58872 404 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 COG1Q8WTW3 980 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 COA7Q96BR5 231 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 DEF6Q9H4E7 631 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
BRCC3-201ENST00000330045 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 TDP2O95551 362 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 SYF2O95926 243 aaKnown RBP17.05■□□□□ 0.32
BRCC3-201ENST00000330045 EIF4A3P38919 411 aaKnown RBP17.05■□□□□ 0.32
BRCC3-201ENST00000330045 ADCY7P51828 1080 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 C2orf54Q08AI8 447 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 PDIA5Q14554 519 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 CCNI2Q6ZMN8 369 aaPredicted RBP17.05■□□□□ 0.32
BRCC3-201ENST00000330045 RAD54LQ92698 747 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 FAM204AQ9H8W3 233 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 CAPN6Q9Y6Q1 641 aa17.05■□□□□ 0.32
BRCC3-201ENST00000330045 POTEMA6NI47 508 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 RNF40O75150 1001 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 LCA5LO95447 670 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 CCDC70Q6NSX1 233 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 CREG2Q8IUH2 290 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 MXD3Q9BW11 206 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 EDIL3O43854 480 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 AKR1B10O60218 316 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 IL1R1P14778 569 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 CHRNA5P30532 468 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 KRT79Q5XKE5 535 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 SNX29Q8TEQ0 813 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 DDX12PQ92771 950 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 ZNF622Q969S3 477 aaKnown RBP eCLIP17.04■□□□□ 0.32
BRCC3-201ENST00000330045 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
BRCC3-201ENST00000330045 LRRC27Q9C0I9 530 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 MLXIPQ9HAP2 919 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
BRCC3-201ENST00000330045 LRRC53A6NM62 1247 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 MOCS3O95396 460 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 IVLP07476 585 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 PRLRP16471 622 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 PSMD2Q13200 908 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 SLF2Q8IX21 1173 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 GDAP1L1Q96MZ0 367 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 RPS6KA5O75582 802 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 MYBL2P10244 700 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
BRCC3-201ENST00000330045 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 MFSD14BQ5SR56 506 aa17.03■□□□□ 0.32
BRCC3-201ENST00000330045 MMGT1Q8N4V1 131 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms