RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 CCDC62Q6P9F0 684 aa27.11■■□□□ 1.93
TMEM54-201ENST00000329151 RALYLQ86SE5 291 aaKnown RBP27.11■■□□□ 1.93
TMEM54-201ENST00000329151 SLC9A7Q96T83 725 aa27.11■■□□□ 1.93
TMEM54-201ENST00000329151 KATNAL1Q9BW62 490 aa27.11■■□□□ 1.93
TMEM54-201ENST00000329151 THEGQ9P2T0 379 aa27.11■■□□□ 1.93
TMEM54-201ENST00000329151 U3KPZ7 1027 aaPredicted RBP27.11■■□□□ 1.93
TMEM54-201ENST00000329151 IQCF3P0C7M6 154 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 KCNJ6P48051 423 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 SART3Q15020 963 aaKnown RBP27.1■■□□□ 1.93
TMEM54-201ENST00000329151 MICALL1Q8N3F8 863 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 C7orf31Q8N865 590 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 CAGE1Q8TC20 777 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 COL20A1Q9P218 1284 aa27.1■■□□□ 1.93
TMEM54-201ENST00000329151 NR3C2P08235 984 aa27.09■■□□□ 1.93
TMEM54-201ENST00000329151 MYCLP12524 364 aaPredicted RBP27.09■■□□□ 1.93
TMEM54-201ENST00000329151 ARHGAP1Q07960 439 aa27.09■■□□□ 1.93
TMEM54-201ENST00000329151 DHX37Q8IY37 1157 aaKnown RBP27.09■■□□□ 1.93
TMEM54-201ENST00000329151 PXMP2Q9NR77 195 aa27.09■■□□□ 1.93
TMEM54-201ENST00000329151 PCDHA1Q9Y5I3 950 aa27.09■■□□□ 1.93
TMEM54-201ENST00000329151 CHD9Q3L8U1 2897 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 ZBTB5O15062 677 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 LAMC2Q13753 1193 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 HOMER1Q86YM7 354 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 STAG2Q8N3U4 1231 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 AFAP1L1Q8TED9 768 aa27.08■■□□□ 1.93
TMEM54-201ENST00000329151 ATXN2LQ8WWM7 1075 aaKnown RBP27.08■■□□□ 1.93
TMEM54-201ENST00000329151 MAP3K20Q9NYL2 800 aaKnown RBP27.08■■□□□ 1.93
TMEM54-201ENST00000329151 BAZ2BQ9UIF8 2168 aaKnown RBP27.08■■□□□ 1.93
TMEM54-201ENST00000329151 IFIT3O14879 490 aaKnown RBP27.07■■□□□ 1.92
TMEM54-201ENST00000329151 GTPBP6O43824 516 aaPredicted RBP27.07■■□□□ 1.92
TMEM54-201ENST00000329151 MYOGP15173 224 aa27.07■■□□□ 1.92
TMEM54-201ENST00000329151 TTC22Q5TAA0 569 aa27.07■■□□□ 1.92
TMEM54-201ENST00000329151 KCNV1Q6PIU1 500 aa27.07■■□□□ 1.92
TMEM54-201ENST00000329151 PHOSPHO2Q8TCD6 241 aa27.07■■□□□ 1.92
TMEM54-201ENST00000329151 ALG1Q9BT22 464 aa27.07■■□□□ 1.92
TMEM54-201ENST00000329151 DDX41Q9UJV9 622 aaKnown RBP27.07■■□□□ 1.92
TMEM54-201ENST00000329151 ADGRE1Q14246 886 aa27.06■■□□□ 1.92
TMEM54-201ENST00000329151 SAMD3Q8N6K7 520 aa27.06■■□□□ 1.92
TMEM54-201ENST00000329151 PRDM6Q9NQX0 595 aa27.06■■□□□ 1.92
TMEM54-201ENST00000329151 BAIAP3O94812 1187 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 PARNO95453 639 aaKnown RBP27.05■■□□□ 1.92
TMEM54-201ENST00000329151 CA3P07451 260 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 CYB5R4Q7L1T6 521 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 SESTD1Q86VW0 696 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 MAD2L2Q9UI95 211 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 TET1Q8NFU7 2136 aa27.05■■□□□ 1.92
TMEM54-201ENST00000329151 SELPP16109 830 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 PSEN2P49810 448 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 HSD17B4P51659 736 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 MRPS5P82675 430 aaKnown RBP27.04■■□□□ 1.92
TMEM54-201ENST00000329151 WTAPQ15007 396 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 SEC23AQ15436 765 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 SKIV2LQ15477 1246 aaKnown RBP27.04■■□□□ 1.92
TMEM54-201ENST00000329151 GDF6Q6KF10 455 aaPredicted RBP27.04■■□□□ 1.92
TMEM54-201ENST00000329151 PPTC7Q8NI37 304 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 EMID1Q96A84 441 aaPredicted RBP27.04■■□□□ 1.92
TMEM54-201ENST00000329151 NCOR1O75376 2440 aa27.04■■□□□ 1.92
TMEM54-201ENST00000329151 GCOM1H8Y6P7 765 aaPredicted RBP27.03■■□□□ 1.92
TMEM54-201ENST00000329151 POLR2MP0CAP2 368 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 CCND2P30279 289 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 HOXA13P31271 388 aaPredicted RBP27.03■■□□□ 1.92
TMEM54-201ENST00000329151 MFSD10Q14728 455 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 LRRC8DQ7L1W4 858 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 NCOA7Q8NI08 942 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 ZBED2Q9BTP6 218 aa27.03■■□□□ 1.92
TMEM54-201ENST00000329151 PALM3A6NDB9 673 aaPredicted RBP27.02■■□□□ 1.92
TMEM54-201ENST00000329151 ZNF286BP0CG31 522 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 GRM4Q14833 912 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 KIAA0753Q2KHM9 967 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 CATIPQ7Z7H3 387 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 HERC6Q8IVU3 1022 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 SPATA33Q96N06 139 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 PDCD2LQ9BRP1 358 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 HDAC6Q9UBN7 1215 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 GTF2IRD1Q9UHL9 959 aa27.02■■□□□ 1.92
TMEM54-201ENST00000329151 TLL1O43897 1013 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 GSPT1P15170 499 aaKnown RBP27.01■■□□□ 1.91
TMEM54-201ENST00000329151 FCHSD1Q86WN1 690 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 KAT2BQ92831 832 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 VWCEQ96DN2 955 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 ASB2Q96Q27 587 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 PIGSQ96S52 555 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 CERS4Q9HA82 394 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 MLXIPQ9HAP2 919 aa27.01■■□□□ 1.91
TMEM54-201ENST00000329151 SUPT16HQ9Y5B9 1047 aaKnown RBP27.01■■□□□ 1.91
TMEM54-201ENST00000329151 TNFRSF10AO00220 468 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 SORBS3O60504 671 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 CYP21A2P08686 494 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 PGM5Q15124 567 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 STOX1Q6ZVD7 989 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 MTMR8Q96EF0 704 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 IL25Q9H293 177 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 CHD7Q9P2D1 2997 aa27■■□□□ 1.91
TMEM54-201ENST00000329151 PPFIA4O75335 1185 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 GGPS1O95749 300 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 PDE4AP27815 886 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 GHRHRQ02643 423 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 GNPTABQ3T906 1256 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 CNKSR3Q6P9H4 555 aa26.99■■□□□ 1.91
TMEM54-201ENST00000329151 ARNTL2Q8WYA1 636 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms