RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 VAV2P52735 878 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 TBC1D16Q8TBP0 767 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 ARHGAP20Q9P2F6 1191 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 CAPN6Q9Y6Q1 641 aa15.6■□□□□ 0.09
ATP2C1-201ENST00000328560 LRRC53A6NM62 1247 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 KIF11P52732 1056 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 CKAP4Q07065 602 aaKnown RBP15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 CENPPQ6IPU0 288 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 MTMR9Q96QG7 549 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 ERGIC2Q96RQ1 377 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 KIAA1551Q9HCM1 1747 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 TRPC5Q9UL62 973 aaPredicted RBP15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 PCDHA13Q9Y5I0 950 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 TACC1O75410 805 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 ADGRF4Q8IZF3 695 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 RIN2Q8WYP3 895 aaPredicted RBP15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 TSG101Q99816 390 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 ACBD3Q9H3P7 528 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 PLEKHA4Q9H4M7 779 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 RIOX1Q9H6W3 641 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 AFF2P51816 1311 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 SPATA31A6Q5VVP1 1343 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 FAM196BA6NMK8 535 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 BUB1O43683 1085 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 PAPD7Q5XG87 772 aaKnown RBP15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 RAD54LQ92698 747 aa15.59■□□□□ 0.09
ATP2C1-201ENST00000328560 DLEC1Q9Y238 1755 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 USP17L10C9JJH3 530 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 GYS1P13807 737 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 PPP1R2P41236 205 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 MAGEA1P43355 309 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 ECM1Q16610 540 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 MAN2A1Q16706 1144 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 EXOC4Q96A65 974 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 DDX4Q9NQI0 724 aaKnown RBP15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 USP40Q9NVE5 1235 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 EHD2Q9NZN4 543 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 STK17AQ9UEE5 414 aa15.58■□□□□ 0.09
ATP2C1-201ENST00000328560 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 NCK2O43639 380 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 KRT18P05783 430 aaKnown RBP15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 PAXIP1Q6ZW49 1069 aaPredicted RBP15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 JMJD4Q9H9V9 463 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 PCDHA12Q9UN75 941 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 RREB1Q92766 1687 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L15C9J2P7 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L13C9JLJ4 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L11C9JVI0 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L18D6R9N7 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L22D6RA61 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L17D6RBQ6 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L19D6RCP7 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L20D6RJB6 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 FGFR1OPO95684 399 aaKnown RBP15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 RASSF7Q02833 373 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L24Q0WX57 530 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 CCDC181Q5TID7 509 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 USP17L6PQ6QN14 398 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 LEKR1Q6ZMV7 388 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 GOLGA6L1Q8N7Z2 621 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 COG1Q8WTW3 980 aa15.58■□□□□ 0.08
ATP2C1-201ENST00000328560 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 NPHP3-ACAD11A0A0J9YXS1 232 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 E9PMD0 336 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 TRIM37O94972 964 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 IL1R1P14778 569 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 APBA1Q02410 837 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 GFPT1Q06210 699 aaPredicted RBP15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 EZH2Q15910 746 aaKnown RBP15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 ASPRV1Q53RT3 343 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 NFRKBQ6P4R8 1299 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 CACNB3P54284 484 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 SLC7A5Q01650 507 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 TCP10Q12799 353 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 MAP9Q49MG5 647 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 ZSCAN29Q8IWY8 852 aaPredicted RBP15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 MYOCDQ8IZQ8 938 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 GUF1Q8N442 669 aaKnown RBP15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 PANK4Q9NVE7 773 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 SERPINB13Q9UIV8 391 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 PLAGL2Q9UPG8 496 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 LAMB1P07942 1786 aa15.57■□□□□ 0.08
ATP2C1-201ENST00000328560 PVALEFA0A1B0GWK0 134 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 TUBBP07437 444 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 MYBL2P10244 700 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 CCDC70Q6NSX1 233 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 CCDC84Q86UT8 332 aaPredicted RBP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 SIK3Q9Y2K2 1263 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 EDIL3O43854 480 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 PPP1R11O60927 126 aaPredicted RBP15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 TTLL1O95922 423 aa15.56■□□□□ 0.08
ATP2C1-201ENST00000328560 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms