RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 RAB34Q9BZG1 259 aa22.11■■□□□ 1.13
SOX2-201ENST00000325404 SIK3Q9Y2K2 1263 aa22.11■■□□□ 1.13
SOX2-201ENST00000325404 JRKLQ9Y4A0 524 aa22.11■■□□□ 1.13
SOX2-201ENST00000325404 BTDP43251 543 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 LMAN1P49257 510 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 GRB10Q13322 594 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 ZNF622Q969S3 477 aaKnown RBP eCLIP22.1■■□□□ 1.13
SOX2-201ENST00000325404 PCMTD1Q96MG8 357 aaPredicted RBP22.1■■□□□ 1.13
SOX2-201ENST00000325404 ZC3H12CQ9C0D7 883 aaKnown RBP22.1■■□□□ 1.13
SOX2-201ENST00000325404 TSPYL1Q9H0U9 437 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 BLOC1S4Q9NUP1 217 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 COL11A2P13942 1736 aaPredicted RBP22.1■■□□□ 1.13
SOX2-201ENST00000325404 LRRIQ3A6PVS8 624 aaPredicted RBP22.1■■□□□ 1.13
SOX2-201ENST00000325404 RIMBP2O15034 1052 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 MAN2A1Q16706 1144 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 TMEM266Q2M3C6 531 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 C2CD5Q86YS7 1000 aa22.1■■□□□ 1.13
SOX2-201ENST00000325404 SAP30BPQ9UHR5 308 aaKnown RBP22.1■■□□□ 1.13
SOX2-201ENST00000325404 KLK7P49862 253 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 TEX11Q8IYF3 940 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 NDST4Q9H3R1 872 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 LRWD1Q9UFC0 647 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 FAN1Q9Y2M0 1017 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 CDK5RAP2Q96SN8 1893 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 GYS2P54840 703 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 USP17L2Q6R6M4 530 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 RIC8AQ9NPQ8 531 aa22.09■■□□□ 1.13
SOX2-201ENST00000325404 TACC1O75410 805 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 IVLP07476 585 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 SEPT2Q15019 361 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 CALCRLQ16602 461 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 PPP1R18Q6NYC8 613 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 MMGT1Q8N4V1 131 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 LARP4BQ92615 738 aaKnown RBP22.08■■□□□ 1.13
SOX2-201ENST00000325404 PNMA5Q96PV4 448 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 PIGSQ96S52 555 aa22.08■■□□□ 1.13
SOX2-201ENST00000325404 IDEP14735 1019 aa22.08■■□□□ 1.12
SOX2-201ENST00000325404 ASPRV1Q53RT3 343 aa22.08■■□□□ 1.12
SOX2-201ENST00000325404 CCDC70Q6NSX1 233 aa22.08■■□□□ 1.12
SOX2-201ENST00000325404 POTEDQ86YR6 584 aa22.08■■□□□ 1.12
SOX2-201ENST00000325404 SNX12Q9UMY4 172 aa22.08■■□□□ 1.12
SOX2-201ENST00000325404 MYMKA6NI61 221 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 H0YIN7 160 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 N4BP1O75113 896 aaKnown RBP22.07■■□□□ 1.12
SOX2-201ENST00000325404 GTF2IP78347 998 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 EHHADHQ08426 723 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 COG1Q8WTW3 980 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 CCDC102AQ96A19 550 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 CEP95Q96GE4 821 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 SH2D4AQ9H788 454 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 GAKO14976 1311 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 A0A0U1RQG5 324 aaPredicted RBP22.07■■□□□ 1.12
SOX2-201ENST00000325404 ZNF263O14978 683 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 RHBDL3P58872 404 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 LEKR1Q6ZMV7 388 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 MTMR7Q9Y216 660 aa22.07■■□□□ 1.12
SOX2-201ENST00000325404 PJA2O43164 708 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 SRGAP2O75044 1071 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 TXKP42681 527 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 TMEM119Q4V9L6 283 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 STYK1Q6J9G0 422 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 CCNI2Q6ZMN8 369 aaPredicted RBP22.06■■□□□ 1.12
SOX2-201ENST00000325404 C10orf71Q711Q0 1435 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 RAD54LQ92698 747 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 SLC39A2Q9NP94 309 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 BIN2Q9UBW5 565 aaPredicted RBP22.06■■□□□ 1.12
SOX2-201ENST00000325404 HPCAL4Q9UM19 191 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 TFR2Q9UP52 801 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 PCDHA13Q9Y5I0 950 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 ADCY7P51828 1080 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 PPP4R3AQ6IN85 833 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 CAGE1Q8TC20 777 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 CDK5RAP3Q96JB5 506 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 CPVLQ9H3G5 476 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 ARHGAP20Q9P2F6 1191 aa22.06■■□□□ 1.12
SOX2-201ENST00000325404 SNHG28P0DPA3 235 aa22.05■■□□□ 1.12
SOX2-201ENST00000325404 IFIH1Q9BYX4 1025 aaKnown RBP22.05■■□□□ 1.12
SOX2-201ENST00000325404 SLC26A4O43511 780 aa22.05■■□□□ 1.12
SOX2-201ENST00000325404 PDHBP11177 359 aa22.05■■□□□ 1.12
SOX2-201ENST00000325404 CYP27A1Q02318 531 aa22.05■■□□□ 1.12
SOX2-201ENST00000325404 CCDC155Q8N6L0 562 aa22.05■■□□□ 1.12
SOX2-201ENST00000325404 NUCKS1Q9H1E3 243 aaKnown RBP22.05■■□□□ 1.12
SOX2-201ENST00000325404 USP17L5A8MUK1 530 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 CAPN2P17655 700 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 TCP1P17987 556 aaKnown RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 KIF11P52732 1056 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 RAD51AP2Q09MP3 1159 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 CCDC96Q2M329 555 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 CREG2Q8IUH2 290 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 TSG101Q99816 390 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 JADE2Q9NQC1 790 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 SUGT1Q9Y2Z0 365 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 DUSP10Q9Y6W6 482 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 ZC3H4Q9UPT8 1303 aaKnown RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 SSU72P8A0A1W2PR75 194 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 PDE2AO00408 941 aaPredicted RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 SF3B2Q13435 895 aaKnown RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 KRT79Q5XKE5 535 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms