RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 EPB41L5Q9HCM4 733 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 PRM3Q9NNZ6 103 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 EXOC3O60645 756 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 ALX1Q15699 326 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.28
VARS2-201ENST00000321897 TRIM68Q6AZZ1 485 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 TMC4Q7Z404 712 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 U2AF1L4Q8WU68 220 aaKnown RBP16.77■□□□□ 0.28
VARS2-201ENST00000321897 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
VARS2-201ENST00000321897 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.27
VARS2-201ENST00000321897 IFNAR2P48551 515 aa16.77■□□□□ 0.27
VARS2-201ENST00000321897 NTRK3Q16288 839 aa16.77■□□□□ 0.27
VARS2-201ENST00000321897 DPH5Q9H2P9 285 aa16.77■□□□□ 0.27
VARS2-201ENST00000321897 CXorf56Q9H5V9 222 aa16.77■□□□□ 0.27
VARS2-201ENST00000321897 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.27
VARS2-201ENST00000321897 E9PMD0 336 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 STAT3P40763 770 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 TTLL12Q14166 644 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 CCDC6Q16204 474 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PROCA1Q8NCQ7 364 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 LRRN2O75325 713 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 RAD17O75943 681 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PACS2Q86VP3 889 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 LARGE2Q8N3Y3 721 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PIGOQ8TEQ8 1089 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 TBC1D5Q92609 795 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 CCDC127Q96BQ5 260 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 MLXIPQ9HAP2 919 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 AGPAT5Q9NUQ2 364 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.76■□□□□ 0.27
VARS2-201ENST00000321897 SERPINA10Q9UK55 444 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PACSIN2Q9UNF0 486 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 ZNF185O15231 689 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 KRT12Q99456 494 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
VARS2-201ENST00000321897 ABHD10Q9NUJ1 306 aa16.76■□□□□ 0.27
VARS2-201ENST00000321897 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 NCK2O43639 380 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 VPS41P49754 854 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 NCAPHQ15003 741 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 NHEJ1Q9H9Q4 299 aaPredicted RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 A0A0U1RQJ8 604 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 EPB41P11171 864 aaKnown RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 NR2F2P24468 414 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 TROAPQ12815 778 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 CFAP221Q4G0U5 840 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 CCDC84Q86UT8 332 aaPredicted RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 CACNA2D3Q8IZS8 1091 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 TUBE1Q9UJT0 475 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 RICTORQ6R327 1708 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 RFX7Q2KHR2 1363 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 GOLGA8KD6RF30 607 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 AKR1B1P15121 316 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 STK4Q13043 487 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 GRAPQ13588 217 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 NEDD9Q14511 834 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 DAAM2Q86T65 1068 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 GRAPLQ8TC17 118 aaPredicted RBP16.75■□□□□ 0.27
VARS2-201ENST00000321897 FBF1Q8TES7 1133 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 RWDD2AQ9UIY3 292 aa16.75■□□□□ 0.27
VARS2-201ENST00000321897 HEXIM1O94992 359 aaKnown RBP16.74■□□□□ 0.27
VARS2-201ENST00000321897 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 HIBCHQ6NVY1 386 aaPredicted RBP16.74■□□□□ 0.27
VARS2-201ENST00000321897 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 TBC1D22AQ8WUA7 517 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 DDX12PQ92771 950 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
VARS2-201ENST00000321897 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 MYO1FO00160 1098 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 ATP1A1P05023 1023 aaKnown RBP16.74■□□□□ 0.27
VARS2-201ENST00000321897 KRT5P13647 590 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 PCK1P35558 622 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 GPSM2P81274 684 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 HAUS3Q68CZ6 603 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 CCDC155Q8N6L0 562 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 MMS19Q96T76 1030 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 SNCBQ16143 134 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 NUP58Q9BVL2 599 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 PCIF1Q9H4Z3 704 aa16.74■□□□□ 0.27
VARS2-201ENST00000321897 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
VARS2-201ENST00000321897 LRRC31Q6UY01 552 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms