RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 RIC1Q4ADV7 1423 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 GOLGA8IPA6NC78 632 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 GOLGA8JA6NMD2 632 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 SRGAP2O75044 1071 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 IRX3P78415 501 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 KIAA0753Q2KHM9 967 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 DDTLA6NHG4 134 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 NOP56O00567 594 aaKnown RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 CCNE1P24864 410 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 CTNNA2P26232 953 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 NF2P35240 595 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 ACER1Q8TDN7 264 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-201ENST00000321105 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 SYNCQ9H7C4 482 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
TOP3A-201ENST00000321105 STXBP3O00186 592 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 WNT7AO00755 349 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 FKBP3Q00688 224 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 PLCB3Q01970 1234 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 TRIM14Q14142 442 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 CHP1Q99653 195 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 RWDD2AQ9UIY3 292 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 ZHX2Q9Y6X8 837 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 TTC26A0AVF1 554 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SRGNP10124 158 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 TNNI1P19237 187 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SMTNP53814 917 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 R3HDM1Q15032 1099 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SHROOM1Q2M3G4 852 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 KSR1Q8IVT5 923 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 AK8Q96MA6 479 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 NAP1L4Q99733 375 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SAR1BQ9Y6B6 198 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 SPATA31A6Q5VVP1 1343 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 CD44P16070 742 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 IGBP1P78318 339 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 EHHADHQ08426 723 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 METTL13Q8N6R0 699 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 NAA15Q9BXJ9 866 aaKnown RBP12.13□□□□□ -0.47
TOP3A-201ENST00000321105 NDST4Q9H3R1 872 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 PIM2Q9P1W9 311 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
TOP3A-201ENST00000321105 ABCB11O95342 1321 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 ZEB2O60315 1214 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 ATP2C2O75185 946 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 CDC25BP30305 580 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 FXR1P51114 621 aaKnown RBP eCLIP12.12□□□□□ -0.47
TOP3A-201ENST00000321105 RASA3Q14644 834 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 C16orf86Q6ZW13 317 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 CCDC50Q8IVM0 306 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 WRNIP1Q96S55 665 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 NUP58Q9BVL2 599 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 KDM3AQ9Y4C1 1321 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 ACTN4O43707 911 aaKnown RBP12.12□□□□□ -0.47
TOP3A-201ENST00000321105 CDR1P51861 262 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 ANKRD40Q6AI12 368 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 WDR24Q96S15 920 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 CTTNBP2NLQ9P2B4 639 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 ANKRD26Q9UPS8 1709 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 PSMD14O00487 310 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 CYTH3O43739 400 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 SLC37A4O43826 429 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 SFR1Q86XK3 245 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 TTC16Q8NEE8 873 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 NOX5Q96PH1 765 aa12.12□□□□□ -0.47
TOP3A-201ENST00000321105 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
TOP3A-201ENST00000321105 A0A087X0B3 334 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
TOP3A-201ENST00000321105 LAD1O00515 517 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms