RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DSG3P32926 999 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 ZNF76P36508 570 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 PPP1R2P41236 205 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 FMR1Q06787 632 aaKnown RBP eCLIP20.02■□□□□ 0.8
RAB39A-201ENST00000320578 SPIRE1Q08AE8 756 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 HAUS3Q68CZ6 603 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 LARP4BQ92615 738 aaKnown RBP20.02■□□□□ 0.8
RAB39A-201ENST00000320578 RAD54LQ92698 747 aa20.02■□□□□ 0.8
RAB39A-201ENST00000320578 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
RAB39A-201ENST00000320578 PHIPQ8WWQ0 1821 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 PVALEFA0A1B0GWK0 134 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 MSH4O15457 936 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 FANCCQ00597 558 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 COG2Q14746 738 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 COBLL1Q53SF7 1204 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.02■□□□□ 0.79
RAB39A-201ENST00000320578 ERMNQ8TAM6 284 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 FANCLQ9NW38 375 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 SNCAIPQ9Y6H5 919 aa20.02■□□□□ 0.79
RAB39A-201ENST00000320578 GLTPD2A6NH11 291 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 CD44P16070 742 aaKnown RBP20.01■□□□□ 0.79
RAB39A-201ENST00000320578 IREB2P48200 963 aaKnown RBP20.01■□□□□ 0.79
RAB39A-201ENST00000320578 HMGCS2P54868 508 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 SETQ01105 290 aaPredicted RBP20.01■□□□□ 0.79
RAB39A-201ENST00000320578 DHX8Q14562 1220 aaKnown RBP20.01■□□□□ 0.79
RAB39A-201ENST00000320578 NIPA1Q7RTP0 329 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 REPS2Q8NFH8 660 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 MED15Q96RN5 788 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 PLIN2Q99541 437 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 RWDD2AQ9UIY3 292 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 NFE2L3Q9Y4A8 694 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 FRMPD4Q14CM0 1322 aa20.01■□□□□ 0.79
RAB39A-201ENST00000320578 MSNP26038 577 aaKnown RBP20■□□□□ 0.79
RAB39A-201ENST00000320578 EPHX2P34913 555 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 TKFCQ3LXA3 575 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 KMT5BQ4FZB7 885 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 CEP55Q53EZ4 464 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 KRT26Q7Z3Y9 468 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 GIMAP8Q8ND71 665 aaPredicted RBP20■□□□□ 0.79
RAB39A-201ENST00000320578 NUDT12Q9BQG2 462 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 RAVER2Q9HCJ3 691 aaKnown RBP20■□□□□ 0.79
RAB39A-201ENST00000320578 HOXC10Q9NYD6 342 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 EIF2AK3Q9NZJ5 1116 aaKnown RBP20■□□□□ 0.79
RAB39A-201ENST00000320578 IMPACTQ9P2X3 320 aa20■□□□□ 0.79
RAB39A-201ENST00000320578 MEIS1O00470 390 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 BCRP11274 1271 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 NF2P35240 595 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 CCT6AP40227 531 aaKnown RBP19.99■□□□□ 0.79
RAB39A-201ENST00000320578 DGKZQ13574 1117 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 VGLL4Q14135 290 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 DRC7Q8IY82 874 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 SLC5A5Q92911 643 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 CSADQ9Y600 493 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 ADM5C9JUS6 153 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 ALAS1P13196 640 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 SAMD1Q6SPF0 538 aaPredicted RBP19.99■□□□□ 0.79
RAB39A-201ENST00000320578 ADSSL1Q8N142 457 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 ATG4CQ96DT6 458 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 IFNKQ9P0W0 207 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 VAV3Q9UKW4 847 aa19.99■□□□□ 0.79
RAB39A-201ENST00000320578 PAPPA2Q9BXP8 1791 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 IQCA1LA6NCM1 817 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 NFIBO00712 420 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 MUTP22033 750 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 RPA1P27694 616 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 STIM1Q13586 685 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 UNC13DQ70J99 1090 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 CPXCR1Q8N123 301 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 SPC24Q8NBT2 197 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 SYTL5Q8TDW5 730 aaPredicted RBP19.98■□□□□ 0.79
RAB39A-201ENST00000320578 POLR3CQ9BUI4 534 aaPredicted RBP19.98■□□□□ 0.79
RAB39A-201ENST00000320578 XPO4Q9C0E2 1151 aaKnown RBP19.98■□□□□ 0.79
RAB39A-201ENST00000320578 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
RAB39A-201ENST00000320578 SYNRGQ9UMZ2 1314 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
RAB39A-201ENST00000320578 POLR2AP24928 1970 aaKnown RBP19.98■□□□□ 0.79
RAB39A-201ENST00000320578 PPATQ06203 517 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PAK1Q13153 545 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 MCM6Q14566 821 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 TRERF1Q96PN7 1200 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 MXRA8Q9BRK3 442 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PARP14Q460N5 1801 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 ZNF500O60304 480 aaPredicted RBP19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PSMD10O75832 226 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 ATP1A3P13637 1013 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 CLCN1P35523 988 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 UBASH3AP57075 661 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 ASIC1P78348 528 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PSMD2Q13200 908 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PPP2R5CQ13362 524 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 GPR162Q16538 588 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 ECM1Q16610 540 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 PCNX4Q63HM2 1172 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 XRRA1Q6P2D8 792 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 CYP2W1Q8TAV3 490 aa19.97■□□□□ 0.79
RAB39A-201ENST00000320578 DHTKD1Q96HY7 919 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms