RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SOCS4Q8WXH5 440 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SLKQ9H2G2 1235 aaPredicted RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 BRMS1Q9HCU9 246 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 SEC63Q9UGP8 760 aaKnown RBP3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 CNTNAP5Q8WYK1 1306 aa3.8□□□□□ -1.8
SCAMP1-201ENST00000320280 F5H6K3 240 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ERVH48-1M5A8F1 160 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ZBTB5O15062 677 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 NDUFB10O96000 172 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ICAM1P05362 532 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 GNA11P29992 359 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 PDIA3P30101 505 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 HUNKP57058 714 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 FGD1P98174 961 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 AKAP17AQ02040 695 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 KLRC3Q07444 240 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SEPT2Q15019 361 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 PFKFB3Q16875 520 aaPredicted RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 RNFT1Q5M7Z0 435 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 NFXL1Q6ZNB6 911 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 DNERQ8NFT8 737 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 FEZ1Q99689 392 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC38A10Q9HBR0 1119 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MAD2L2Q9UI95 211 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 KLF18A0A0U1RQI7 1052 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 VCAM1P19320 739 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC1A4P43007 532 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 AK2P54819 239 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SSRP1Q08945 709 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 PKN2Q16513 984 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MAP1SQ66K74 1059 aaPredicted RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 KCNV1Q6PIU1 500 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 BRAPQ7Z569 592 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SIAH1Q8IUQ4 282 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 CCDC155Q8N6L0 562 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 REPS2Q8NFH8 660 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MORC4Q8TE76 937 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 DYNLL2Q96FJ2 89 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 AMNQ9BXJ7 453 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ZSCAN16Q9H4T2 348 aaPredicted RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 PCDHAC2Q9Y5I4 1007 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ATP6V1DQ9Y5K8 247 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ASTN2O75129 1339 aaPredicted RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 LAD1O00515 517 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MPHOSPH10O00566 681 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MAFGO15525 162 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 GCFC2P16383 781 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 MUTP22033 750 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 HOXD10P28358 340 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 RFC5P40937 340 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 NEK4P51957 841 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 C1QTNF8P60827 252 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SKIV2LQ15477 1246 aaKnown RBP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 NTRK3Q16288 839 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 TPRNQ4KMQ1 711 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 GPAT2Q6NUI2 795 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 SH3RF1Q7Z6J0 888 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 ERO1AQ96HE7 468 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 CDK15Q96Q40 435 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 IWS1Q96ST2 819 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 TEX13BQ9BXU2 312 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 CLIP2Q9UDT6 1046 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 PPME1Q9Y570 386 aa3.79□□□□□ -1.8
SCAMP1-201ENST00000320280 WDR33Q9C0J8 1336 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC15A5A6NIM6 579 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CPLX1O14810 134 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 INPP5BP32019 993 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNF157P51786 506 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CACNB3P54284 484 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 HAND2P61296 217 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 NKX3-2P78367 333 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 IRX3P78415 501 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 NUCB2P80303 420 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 PTK2Q05397 1052 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ADCK5Q3MIX3 580 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 OLFML2BQ68BL8 750 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ZMYND12Q9H0C1 365 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 FOXP1Q9H334 677 aaPredicted RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 TOMM22Q9NS69 142 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 BARHL2Q9NY43 387 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 TACC3Q9Y6A5 838 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ZHX2Q9Y6X8 837 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SYNGAP1Q96PV0 1343 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CCL15-CCL14A0A0B4J2E2 113 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 KLRF2D3W0D1 207 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 WIPF1O43516 503 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 BCRP11274 1271 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 XRCC5P13010 732 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SCG2P13521 617 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 IRS1P35568 1242 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 ADD1P35611 737 aaKnown RBP3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 SEMA3FQ13275 785 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 TRIM29Q14134 588 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 RAB3GAP1Q15042 981 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CCL15Q16663 113 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 KRT25Q7Z3Z0 450 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 NBPF11Q86T75 865 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 BRF1Q92994 677 aa3.78□□□□□ -1.8
SCAMP1-201ENST00000320280 CUL5Q93034 780 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms