RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ATF7P17544 494 aaPredicted RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 TRPC3Q13507 836 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 SNX1Q13596 522 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 UBL4BQ8N7F7 174 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 LARSQ9P2J5 1176 aaKnown RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 COL4A3BPQ9Y5P4 624 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 ATP2A1O14983 1001 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 MKRN4PQ13434 485 aaPredicted RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 CASP8Q14790 479 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 SEPT2Q15019 361 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 MAN2A1Q16706 1144 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 PFKFB3Q16875 520 aaPredicted RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 ABHD10Q9NUJ1 306 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 STK32BQ9NY57 414 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 STRN3Q13033 797 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 LRRC45Q96CN5 670 aa18.07■□□□□ 0.48
CLIP4-201ENST00000320081 DHTKD1Q96HY7 919 aaPredicted RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 NAP1L4Q99733 375 aaKnown RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 FBXO2Q9UK22 296 aaPredicted RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 USP42Q9H9J4 1324 aaKnown RBP18.07■□□□□ 0.48
CLIP4-201ENST00000320081 LRRIQ4A6NIV6 560 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 GRAPQ13588 217 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 SGMS1Q86VZ5 419 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 CHURC1Q8WUH1 139 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 PPP1R16BQ96T49 567 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 ADGRG1Q9Y653 693 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 ADGRB1O14514 1584 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 PHLPP2Q6ZVD8 1323 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 DGKHQ86XP1 1220 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 POTEFA5A3E0 1075 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 EIF2AK2P19525 551 aaKnown RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 TMOD1P28289 359 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 ZBED6P86452 979 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 TUBB2AQ13885 445 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 CDC37Q16543 378 aaPredicted RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 POTEEQ6S8J3 1075 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 TUBB2BQ9BVA1 445 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 BRIP1Q9BX63 1249 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 OSBPL5Q9H0X9 879 aaPredicted RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 GFPT1Q06210 699 aaPredicted RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 TRIP13Q15645 432 aaPredicted RBP18.06■□□□□ 0.48
CLIP4-201ENST00000320081 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 SMARCAL1Q9NZC9 954 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 ATP8A1Q9Y2Q0 1164 aa18.06■□□□□ 0.48
CLIP4-201ENST00000320081 KDM3AQ9Y4C1 1321 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 CEMIPQ8WUJ3 1361 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 KRT15P19012 456 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 TACO1Q9BSH4 297 aaKnown RBP18.05■□□□□ 0.48
CLIP4-201ENST00000320081 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 ARL1P40616 181 aaPredicted RBP18.05■□□□□ 0.48
CLIP4-201ENST00000320081 PLTPP55058 493 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 ARHGEF16Q5VV41 709 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 FAM186BQ8IYM0 893 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 KIFAP3Q92845 792 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 NKIRAS1Q9NYS0 192 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 COMMD10Q9Y6G5 202 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 TBC1D8O95759 1140 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 RASA3Q14644 834 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
CLIP4-201ENST00000320081 ZNF668Q96K58 619 aaPredicted RBP18.05■□□□□ 0.48
CLIP4-201ENST00000320081 NSRP1Q9H0G5 558 aaKnown RBP18.05■□□□□ 0.48
CLIP4-201ENST00000320081 GCNT4Q9P109 453 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 TTLL3Q9Y4R7 772 aa18.05■□□□□ 0.48
CLIP4-201ENST00000320081 CCDC151A5D8V7 595 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 HNRNPDLO14979 420 aaKnown RBP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 TRIM28Q13263 835 aaKnown RBP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 ITPK1Q13572 414 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 POMGNT1Q8WZA1 660 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 ZNF577Q9BSK1 485 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 COL15A1P39059 1388 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 AKR1B1P15121 316 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 HNRNPH2P55795 449 aaKnown RBP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 CAPS2Q9BXY5 557 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 BAIAP2L1Q9UHR4 511 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 NFU1Q9UMS0 254 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 CAPN7Q9Y6W3 813 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 C21orf2O43822 256 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 PCP11498 1178 aaKnown RBP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 IGBP1P78318 339 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
CLIP4-201ENST00000320081 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLIP4-201ENST00000320081 LRRC53A6NM62 1247 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 ZNF185O15231 689 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 BMP3P12645 472 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 GALNT17Q6IS24 598 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 NFRKBQ6P4R8 1299 aa18.03■□□□□ 0.48
CLIP4-201ENST00000320081 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms