RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 HINFPQ9BQA5 517 aa21.16■□□□□ 0.98
RTN4-201ENST00000317610 ESYT2A0FGR8 921 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 GOLGA8HP0CJ92 632 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 FXR2P51116 673 aaKnown RBP eCLIP21.15■□□□□ 0.982e-7■□□□□ 9.1
RTN4-201ENST00000317610 EHHADHQ08426 723 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 HGSNATQ68CP4 663 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 TBCKQ8TEA7 893 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 MTMR8Q96EF0 704 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 NOX5Q96PH1 765 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 SMARCAL1Q9NZC9 954 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 CXCR5P32302 372 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 CCT5P48643 541 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 TTMPQ5BVD1 217 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 C8orf74Q6P047 294 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 RBM12Q9NTZ6 932 aaKnown RBP21.15■□□□□ 0.98
RTN4-201ENST00000317610 STX8Q9UNK0 236 aa21.15■□□□□ 0.98
RTN4-201ENST00000317610 STRCQ7RTU9 1775 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 EBAG9O00559 213 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 NCK2O43639 380 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 HSF2BPO75031 334 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 MATR3P43243 847 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■□□□ 13.8
RTN4-201ENST00000317610 PPP4CP60510 307 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 TXNRD3Q86VQ6 643 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 SLC44A5Q8NCS7 719 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 IPO4Q8TEX9 1081 aaKnown RBP21.14■□□□□ 0.97
RTN4-201ENST00000317610 LARP4BQ92615 738 aaKnown RBP21.14■□□□□ 0.97
RTN4-201ENST00000317610 GDF3Q9NR23 364 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 EHD2Q9NZN4 543 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 SNED1Q8TER0 1413 aa21.14■□□□□ 0.97
RTN4-201ENST00000317610 GNGT1P63211 74 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 DDB1Q16531 1140 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 SYN2Q92777 582 aaPredicted RBP21.13■□□□□ 0.97
RTN4-201ENST00000317610 ZNF335Q9H4Z2 1342 aaPredicted RBP21.13■□□□□ 0.97
RTN4-201ENST00000317610 SBF2Q86WG5 1849 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 A0A0G2JS52 829 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 GFPT1Q06210 699 aaPredicted RBP21.13■□□□□ 0.97
RTN4-201ENST00000317610 PSMD2Q13200 908 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 CFAP221Q4G0U5 840 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 ICE2Q659A1 982 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 PROM2Q8N271 834 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 ARL8AQ96BM9 186 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 RIC8AQ9NPQ8 531 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 MTMR7Q9Y216 660 aa21.13■□□□□ 0.97
RTN4-201ENST00000317610 SLC1A4P43007 532 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 MRPS25P82663 173 aaKnown RBP21.12■□□□□ 0.97
RTN4-201ENST00000317610 RASSF7Q02833 373 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 KCNMA1Q12791 1236 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 SOGA3Q5TF21 947 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 MARCH10Q8NA82 808 aaPredicted RBP21.12■□□□□ 0.97
RTN4-201ENST00000317610 BCAS4Q8TDM0 211 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 PSMB7Q99436 277 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 NUCKS1Q9H1E3 243 aaKnown RBP21.12■□□□□ 0.97
RTN4-201ENST00000317610 EHD4Q9H223 541 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 JAG2Q9Y219 1238 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 CDK5RAP2Q96SN8 1893 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 LDHBP07195 334 aaKnown RBP21.12■□□□□ 0.97
RTN4-201ENST00000317610 TXKP42681 527 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 APBA1Q02410 837 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 IFT20Q8IY31 132 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 REXO1Q8N1G1 1221 aaKnown RBP21.12■□□□□ 0.97
RTN4-201ENST00000317610 RAD54LQ92698 747 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 RUFY1Q96T51 708 aa21.12■□□□□ 0.97
RTN4-201ENST00000317610 DDX60LQ5H9U9 1706 aaKnown RBP21.11■□□□□ 0.97
RTN4-201ENST00000317610 SHTN1A0MZ66 631 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 CALCRLQ16602 461 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 TBC1D9BQ66K14 1250 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 MREGQ8N565 214 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 WDR66Q8TBY9 1149 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 NLRP3Q96P20 1036 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 ZIM3Q96PE6 472 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 CEP72Q9P209 647 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 FAM169AQ9Y6X4 670 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 BAG3O95817 575 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 GSTO1P78417 241 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 PDIA5Q14554 519 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 ZCWPW2Q504Y3 356 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 CACNA2D4Q7Z3S7 1137 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 IQCKQ8N0W5 287 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 ANKRD13CQ8N6S4 541 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 TSG101Q99816 390 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 LRRC27Q9C0I9 530 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 ZNF287Q9HBT7 754 aa21.11■□□□□ 0.97
RTN4-201ENST00000317610 SEC63Q9UGP8 760 aaKnown RBP21.11■□□□□ 0.97
RTN4-201ENST00000317610 ATXN2Q99700 1313 aaKnown RBP21.1■□□□□ 0.97
RTN4-201ENST00000317610 ATAD5Q96QE3 1844 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 TMEM119Q4V9L6 283 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 EMC10Q5UCC4 262 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 DYMQ7RTS9 669 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 NEDD1Q8NHV4 660 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 TGFBRAP1Q8WUH2 860 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 NYXQ9GZU5 481 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 THRAP3Q9Y2W1 955 aaKnown RBP21.1■□□□□ 0.97
RTN4-201ENST00000317610 GRID2IPA4D2P6 1211 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 hCG_1984214I3L0E3 225 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 SERPING1P05155 500 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 TMEM266Q2M3C6 531 aa21.1■□□□□ 0.97
RTN4-201ENST00000317610 SLC9C1Q4G0N8 1177 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms