RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ASIC1P78348 528 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 PPP2R3AQ06190 1150 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 STK4Q13043 487 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SYDE2Q5VT97 1194 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 MLKLQ8NB16 471 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 DAGLBQ8NCG7 672 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 AGBL1Q96MI9 1066 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 DEFB129Q9H1M3 183 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 LCMT1Q9UIC8 334 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 HACL1Q9UJ83 578 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 FAM86B1E9PN63 330 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 OPLAHO14841 1288 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 ZBTB39O15060 712 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 N4BP1O75113 896 aaKnown RBP8.51□□□□□ -1.05
TRIM55-202ENST00000315962 FAM86B2P0C5J1 330 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 RHOXF2BP0C7M4 288 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 CASQ1P31415 396 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 CYP2C19P33261 490 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 NT5DC1Q5TFE4 455 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 RGS22Q8NE09 1264 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SPATA20Q8TB22 786 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 CDK5RAP3Q96JB5 506 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 GDAP1L1Q96MZ0 367 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 BAG1Q99933 345 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-202ENST00000315962 RHOXF2Q9BQY4 288 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 SH2D3AQ9BRG2 576 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 FAM53CQ9NYF3 392 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 TFR2Q9UP52 801 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 ZNF541Q9H0D2 1346 aa8.51□□□□□ -1.05
TRIM55-202ENST00000315962 E9PMD0 336 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 H3BQF6 201 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SORBS3O60504 671 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ZRANB2O95218 330 aaKnown RBP eCLIP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 CAP2P40123 477 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 EPS15P42566 896 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 TGFB2P61812 414 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ANGEL2Q5VTE6 544 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 GALNT17Q6IS24 598 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 TMEM139Q8IV31 216 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 VSTM4Q8IW00 320 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 DHX37Q8IY37 1157 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 NELFBQ8WX92 580 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 MKL1Q969V6 931 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 PARD6BQ9BYG5 372 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SYNRGQ9UMZ2 1314 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 PLIN4Q96Q06 1357 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 DDX39AO00148 427 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 IKBKBO14920 756 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ZNF76P36508 570 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 FKBP1AP62942 108 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 PDE4DQ08499 809 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SMC1AQ14683 1233 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 CC2D1AQ6P1N0 951 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 C10orf67Q8IYJ2 551 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 WNK4Q96J92 1243 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 GSDMAQ96QA5 445 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ANO3Q9BYT9 981 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ARGLU1Q9NWB6 273 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 TAB2Q9NYJ8 693 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 KIAA1024Q9UPX6 916 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 POTECB2RU33 542 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 KIF2AO00139 706 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 PSMC6P62333 389 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SPP2Q13103 211 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 GRB10Q13322 594 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 MTMR2Q13614 643 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 TRPM4Q8TD43 1214 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 BPIFA3Q9BQP9 254 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
TRIM55-202ENST00000315962 HERC5Q9UII4 1024 aaKnown RBP8.5□□□□□ -1.05
TRIM55-202ENST00000315962 SMCHD1A6NHR9 2005 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 RBAK-RBAKDNI3L0D1 243 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 DDNO94850 711 aaPredicted RBP8.49□□□□□ -1.05
TRIM55-202ENST00000315962 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 PTGER2P43116 358 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 NCAPH2Q6IBW4 605 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 TC2NQ8N9U0 490 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 CALML4Q96GE6 196 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 RGL1Q9NZL6 768 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 FAM170AA1A519 330 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 MYMKA6NI61 221 aa8.49□□□□□ -1.05
TRIM55-202ENST00000315962 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms