RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 TRIB2Q92519 343 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 MBOAT7Q96N66 472 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 PTPN22Q9Y2R2 807 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 UBIAD1Q9Y5Z9 338 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 PTCH2Q9Y6C5 1203 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 DOCK3Q8IZD9 2030 aa14.42□□□□□ -0.1
CHMP2A-201ENST00000312547 CYP3A7-CYP3A51PA0A087WV96 503 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 WNT7AO00755 349 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 ADCY3O60266 1144 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 STAM2O75886 525 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 F13A1P00488 732 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 CYP3A7P24462 503 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 RGS19P49795 217 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 NUCB2P80303 420 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 PDE4DQ08499 809 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 STXBP2Q15833 593 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 MOXD1Q6UVY6 613 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 RAET1EQ8TD07 263 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 MPHOSPH6Q99547 160 aaKnown RBP14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
CHMP2A-201ENST00000312547 IGLV3-22A0A075B6J6 115 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 CCDC85CA6NKD9 419 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 FAM86B1E9PN63 330 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 MEIS1O00470 390 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 RGS20O76081 388 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 FAM86B2P0C5J1 330 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 MYCLP12524 364 aaPredicted RBP14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 ITGB5P18084 799 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 CYP2C19P33261 490 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 CEP55Q53EZ4 464 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 MYSM1Q5VVJ2 828 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 PPP4R3AQ6IN85 833 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 NIPA1Q7RTP0 329 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 LENG9Q96B70 501 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 MXRA8Q9BRK3 442 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 VTA1Q9NP79 307 aa14.4□□□□□ -0.1
CHMP2A-201ENST00000312547 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 HMGCRP04035 888 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 ZNF865P0CJ78 1059 aaPredicted RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 ELNP15502 786 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 GCFC2P16383 781 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 LETM2Q2VYF4 491 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 RILPL1Q5EBL4 403 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 FOXD4L5Q5VV16 416 aaPredicted RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 TAPT1Q6NXT6 567 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 CYP2W1Q8TAV3 490 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 ZFP91Q96JP5 570 aaPredicted RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 MCOLN1Q9GZU1 580 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 ABHD16BQ9H3Z7 469 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 RTEL1Q9NZ71 1219 aa14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 NOL7Q9UMY1 257 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 ZNFX1Q9P2E3 1918 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-201ENST00000312547 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 SPATA31C2B4DYI2 1134 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 TDP2O95551 362 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 CYBAP13498 195 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 GRK4P32298 578 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 ICAM3P32942 547 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 TRIM32Q13049 653 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 SEMA3FQ13275 785 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 ACVR2BQ13705 512 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 PKN2Q16513 984 aaKnown RBP14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 Q4G0T1 1027 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 TTC38Q5R3I4 469 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 FBXO16Q8IX29 292 aaPredicted RBP14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 TRPV1Q8NER1 839 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 GPRASP2Q96D09 838 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 CNPY2Q9Y2B0 182 aa14.38□□□□□ -0.11
CHMP2A-201ENST00000312547 MAFGO15525 162 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 SLC37A4O43826 429 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 CCNT1O60563 726 aaKnown RBP14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 ZNF76P36508 570 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 CACNB2Q08289 660 aaPredicted RBP14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 NBR1Q14596 966 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 FBXO46Q6PJ61 603 aaPredicted RBP14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 EEPD1Q7L9B9 569 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 PLXNA1Q9UIW2 1896 aa14.37□□□□□ -0.11
CHMP2A-201ENST00000312547 FIBPO43427 364 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 INHAP05111 366 aa14.36□□□□□ -0.11
CHMP2A-201ENST00000312547 ARP10275 920 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms