RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 BCAS3Q9H6U6 928 aa10.41□□□□□ -0.74
PDE4D-201ENST00000309641 BTBD18B2RXH4 712 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 MMP1P03956 469 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 SMPD1P17405 629 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 EN2P19622 333 aaPredicted RBP10.4□□□□□ -0.74
PDE4D-201ENST00000309641 STXBP2Q15833 593 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 FAM184AQ8NB25 1140 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 DAGLBQ8NCG7 672 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 U2AF1L4Q8WU68 220 aaKnown RBP10.4□□□□□ -0.74
PDE4D-201ENST00000309641 WASF1Q92558 559 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 COPS5Q92905 334 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 C8orf76Q96K31 380 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 UIMC1Q96RL1 719 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
PDE4D-201ENST00000309641 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 MYH7BA7E2Y1 1941 aa10.4□□□□□ -0.74
PDE4D-201ENST00000309641 SORBS3O60504 671 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.75
PDE4D-201ENST00000309641 PGK1P00558 417 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 GJB1P08034 283 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 ITGB5P18084 799 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 CCND2P30279 289 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 SREBF1P36956 1147 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 ARHGAP4P98171 946 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 SP2Q02086 613 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 SEMA3FQ13275 785 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 AP3B2Q13367 1082 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 LY6KQ17RY6 165 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 PCNX4Q63HM2 1172 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 HSCBQ8IWL3 235 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 FBXO18Q8NFZ0 1043 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 TNFRSF25Q93038 417 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 WDR11Q9BZH6 1224 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 VTA1Q9NP79 307 aa10.4□□□□□ -0.75
PDE4D-201ENST00000309641 KIAA1217Q5T5P2 1943 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 LOC102724159A0A0B4J2E5 919 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 MYADML2A6NDP7 307 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 KIF28PB7ZC32 967 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 AKR1A1P14550 325 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 XBP1P17861 261 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 PWP2Q15269 919 aaKnown RBP10.39□□□□□ -0.75
PDE4D-201ENST00000309641 CCDC62Q6P9F0 684 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 DIS3L2Q8IYB7 885 aaKnown RBP10.39□□□□□ -0.75
PDE4D-201ENST00000309641 BICD2Q8TD16 824 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 GLT8D2Q9H1C3 349 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 FAM184BQ9ULE4 1060 aa10.39□□□□□ -0.75
PDE4D-201ENST00000309641 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.39□□□□□ -0.75
PDE4D-201ENST00000309641 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 FAM86B1E9PN63 330 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 WNT7AO00755 349 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 SGPL1O95470 568 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 FAM86B2P0C5J1 330 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 GJA8P48165 433 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 TNFAIP2Q03169 654 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 INF2Q27J81 1249 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 GNEQ9Y223 722 aaKnown RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 TELO2Q9Y4R8 837 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 UBIAD1Q9Y5Z9 338 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 FRMPD3Q5JV73 1810 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 CTAGE5O15320 804 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 ATP9AO75110 1047 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 CAPN15O75808 1086 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 TXNP10599 105 aaKnown RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 KRT2P35908 639 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 TRIM29Q14134 588 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 GALNT17Q6IS24 598 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 SCFD2Q8WU76 684 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 MPHOSPH6Q99547 160 aaKnown RBP10.38□□□□□ -0.75
PDE4D-201ENST00000309641 PKD2L1Q9P0L9 805 aa10.38□□□□□ -0.75
PDE4D-201ENST00000309641 SYNRGQ9UMZ2 1314 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 B4DLN1 442 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DYNC1LI2O43237 492 aaPredicted RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DUSP11O75319 330 aaKnown RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 TFRCP02786 760 aaKnown RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 ARP10275 920 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 RARBP10826 455 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 BEX3Q00994 111 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DUSP28Q4G0W2 176 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 FAM177A1Q8N128 213 aaPredicted RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DIS3LQ8TF46 1054 aaKnown RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 INTS4Q96HW7 963 aaKnown RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DDX41Q9UJV9 622 aaKnown RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 OGDHLQ9ULD0 1010 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 MRVI1Q9Y6F6 885 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 DOCK5Q9H7D0 1870 aa10.37□□□□□ -0.75
PDE4D-201ENST00000309641 TNRC18O15417 2968 aaPredicted RBP10.37□□□□□ -0.75
PDE4D-201ENST00000309641 IGLV3-22A0A075B6J6 115 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms