RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ADAMTS4O75173 837 aa22.72■■□□□ 1.23
VEGFB-201ENST00000309422 CST5P28325 142 aaPredicted RBP22.72■■□□□ 1.23
VEGFB-201ENST00000309422 UBE2SQ16763 222 aa22.72■■□□□ 1.23
VEGFB-201ENST00000309422 NLRX1Q86UT6 975 aa22.72■■□□□ 1.23
VEGFB-201ENST00000309422 UPF3AQ9H1J1 476 aaKnown RBP22.72■■□□□ 1.23
VEGFB-201ENST00000309422 STARD7Q9NQZ5 370 aa22.72■■□□□ 1.23
VEGFB-201ENST00000309422 LRRC37A2A6NM11 1700 aa22.71■■□□□ 1.23
VEGFB-201ENST00000309422 RBM47A0AV96 593 aaKnown RBP22.71■■□□□ 1.23
VEGFB-201ENST00000309422 ESYT2A0FGR8 921 aa22.71■■□□□ 1.23
VEGFB-201ENST00000309422 MEIS2O14770 477 aa22.71■■□□□ 1.23
VEGFB-201ENST00000309422 SCRN1Q12765 414 aa22.71■■□□□ 1.23
VEGFB-201ENST00000309422 CDHR1Q96JP9 859 aa22.71■■□□□ 1.23
VEGFB-201ENST00000309422 GNEQ9Y223 722 aaKnown RBP22.71■■□□□ 1.23
VEGFB-201ENST00000309422 GH1P01241 217 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 COL6A1P12109 1028 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 NLRP5P59047 1200 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 FRMPD4Q14CM0 1322 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 NTRK3Q16288 839 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 PCNX4Q63HM2 1172 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 VSIG10LQ86VR7 867 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 FAM177A1Q8N128 213 aaPredicted RBP22.7■■□□□ 1.22
VEGFB-201ENST00000309422 REXO1Q8N1G1 1221 aaKnown RBP22.7■■□□□ 1.22
VEGFB-201ENST00000309422 SH3GLB2Q9NR46 395 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 PHF24Q9UPV7 400 aa22.7■■□□□ 1.22
VEGFB-201ENST00000309422 FRMPD3Q5JV73 1810 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 STK36Q9NRP7 1315 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 PPFIA3O75145 1194 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 CABYRO75952 493 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 ACLYP53396 1101 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 ATN1P54259 1190 aaPredicted RBP22.69■■□□□ 1.22
VEGFB-201ENST00000309422 GTF3C6Q969F1 213 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 FERMT2Q96AC1 680 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 POLR3EQ9NVU0 708 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 PRKAG2Q9UGJ0 569 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 PCDHA6Q9UN73 950 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 LIMCH1Q9UPQ0 1083 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 PCDHA8Q9Y5H6 950 aa22.69■■□□□ 1.22
VEGFB-201ENST00000309422 BAZ2BQ9UIF8 2168 aaKnown RBP22.68■■□□□ 1.22
VEGFB-201ENST00000309422 A0A1W2PQ45 241 aaPredicted RBP22.68■■□□□ 1.22
VEGFB-201ENST00000309422 A0A1W2PQY0 241 aa22.68■■□□□ 1.22
VEGFB-201ENST00000309422 MNX1P50219 401 aaPredicted RBP22.68■■□□□ 1.22
VEGFB-201ENST00000309422 KCNA10Q16322 511 aa22.68■■□□□ 1.22
VEGFB-201ENST00000309422 KLHDC9Q8NEP7 349 aa22.68■■□□□ 1.22
VEGFB-201ENST00000309422 ZSCAN31Q96LW9 406 aaPredicted RBP22.68■■□□□ 1.22
VEGFB-201ENST00000309422 LCTP09848 1927 aa22.68■■□□□ 1.22
VEGFB-201ENST00000309422 MROH7Q68CQ1 1323 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 ADCY6O43306 1168 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 FIBPO43427 364 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 KPNA6O60684 536 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 ASGR1P07306 291 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 TGFB3P10600 412 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 ZNF76P36508 570 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 C7orf61Q8IZ16 206 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 ANO3Q9BYT9 981 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 ZMYND12Q9H0C1 365 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 SH2B1Q9NRF2 756 aaPredicted RBP22.67■■□□□ 1.22
VEGFB-201ENST00000309422 VPS54Q9P1Q0 977 aa22.67■■□□□ 1.22
VEGFB-201ENST00000309422 BEX3Q00994 111 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 TRIM29Q14134 588 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 GALNT17Q6IS24 598 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 TYW1BQ6NUM6 668 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 DHX37Q8IY37 1157 aaKnown RBP22.66■■□□□ 1.22
VEGFB-201ENST00000309422 IL31RAQ8NI17 732 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 BRMS1Q9HCU9 246 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 ATP11BQ9Y2G3 1177 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 SMCHD1A6NHR9 2005 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 ELP1O95163 1332 aa22.66■■□□□ 1.22
VEGFB-201ENST00000309422 MYL3P08590 195 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 LAMC2Q13753 1193 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 NEDD9Q14511 834 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 PKN1Q16512 942 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 ME3Q16798 604 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 PRPF38BQ5VTL8 546 aaKnown RBP22.65■■□□□ 1.22
VEGFB-201ENST00000309422 GIMAP8Q8ND71 665 aaPredicted RBP22.65■■□□□ 1.22
VEGFB-201ENST00000309422 SEZ6LQ9BYH1 1024 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 MLXIPQ9HAP2 919 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 ORC3Q9UBD5 711 aaPredicted RBP22.65■■□□□ 1.22
VEGFB-201ENST00000309422 MCM3APO60318 1980 aa22.65■■□□□ 1.22
VEGFB-201ENST00000309422 A0A0U1RQG5 324 aaPredicted RBP22.64■■□□□ 1.22
VEGFB-201ENST00000309422 MYADML2A6NDP7 307 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 NOP56O00567 594 aaKnown RBP22.64■■□□□ 1.22
VEGFB-201ENST00000309422 RTP1P59025 263 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 NKX3-2P78367 333 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 LY6KQ17RY6 165 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 JAKMIP3Q5VZ66 844 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 SLC39A5Q6ZMH5 540 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 NECAB1Q8N987 351 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 GPRASP2Q96D09 838 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 RTEL1Q9NZ71 1219 aa22.64■■□□□ 1.22
VEGFB-201ENST00000309422 DDX41Q9UJV9 622 aaKnown RBP22.64■■□□□ 1.22
VEGFB-201ENST00000309422 MCM2P49736 904 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 MTMR1Q13613 665 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 TBC1D32Q96NH3 1257 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 INPP4AQ96PE3 977 aaPredicted RBP22.63■■□□□ 1.21
VEGFB-201ENST00000309422 TCEAL9Q9UHQ7 104 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 ARIH2O95376 493 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 GGPS1O95749 300 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 DGKDQ16760 1214 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 LRRC26Q2I0M4 334 aa22.63■■□□□ 1.21
VEGFB-201ENST00000309422 CCDC62Q6P9F0 684 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms