RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 FAM237AA0A1B0GTK4 181 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 DYNC1LI2O43237 492 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 MRPL12P52815 198 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 HERVK_113P62684 666 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 PNOCQ13519 176 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TMEM132BQ14DG7 1078 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TPD52L1Q16890 204 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 LY6KQ17RY6 165 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 GRIPAP1Q4V328 841 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 DGKHQ86XP1 1220 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TMEM139Q8IV31 216 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 BRI3BPQ8WY22 251 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TTC12Q9H892 705 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 BTBD7Q9P203 1132 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 HERC5Q9UII4 1024 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 GOLGA4Q13439 2230 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 BDP1A6H8Y1 2624 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 IGF2BP3O00425 579 aaKnown RBP eCLIP5.56□□□□□ -1.52
CAST-201ENST00000309190 NOP56O00567 594 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 CTNND1O60716 968 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 RBM10P98175 930 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 TRIM32Q13049 653 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 MCM6Q14566 821 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 NOSTRINQ8IVI9 506 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 SHISA4Q96DD7 197 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 ZNF274Q96GC6 653 aaPredicted RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 GTPBP4Q9BZE4 634 aaKnown RBP5.56□□□□□ -1.52
CAST-201ENST00000309190 TNMDQ9H2S6 317 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 TRIM17Q9Y577 477 aa5.56□□□□□ -1.52
CAST-201ENST00000309190 ZBTB5O15062 677 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 SLC37A4O43826 429 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 ZRANB2O95218 330 aaKnown RBP eCLIP5.55□□□□□ -1.52
CAST-201ENST00000309190 GJB1P08034 283 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 IFNAR1P17181 557 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PSMC4P43686 418 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 NDUFA8P51970 172 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 NPEPPSP55786 919 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 GABPAQ06546 454 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 SLC20A2Q08357 652 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PKN1Q16512 942 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 TICAM2Q86XR7 235 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 ERO1BQ86YB8 467 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 LEO1Q8WVC0 666 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 ZNF830Q96NB3 372 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 PTPN18Q99952 460 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 CSRNP2Q9H175 543 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 MLXIPQ9HAP2 919 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 SWAP70Q9UH65 585 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 BECN2A8MW95 431 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 GCOM1H8Y6P7 765 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 CTSHP09668 335 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 C6orf222P0C671 652 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 POLR2MP0CAP2 368 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 ARP10275 920 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 LIFRP42702 1097 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 NTRK3Q16288 839 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 FAM163AQ96GL9 167 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 PCMTD1Q96MG8 357 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 NUDT12Q9BQG2 462 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 AS3MTQ9HBK9 375 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PCDHA7Q9UN72 937 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PCDHA6Q9UN73 950 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PCDHA8Q9Y5H6 950 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 UBR3Q6ZT12 1888 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 POTEFA5A3E0 1075 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 LETM1O95202 739 aaPredicted RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 PYGBP11216 843 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 CA8P35219 290 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 CRHR2Q13324 411 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 SNAPC2Q13487 334 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 ALX1Q15699 326 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 PLA2G4FQ68DD2 849 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 POTEGQ6S5H5 508 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 POTEEQ6S8J3 1075 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 SNX29Q8TEQ0 813 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 TCHPQ9BT92 498 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 KIFC3Q9BVG8 833 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 APOL6Q9BWW8 343 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 KIAA1024Q9UPX6 916 aa5.55□□□□□ -1.52
CAST-201ENST00000309190 RBBP6Q7Z6E9 1792 aaKnown RBP5.55□□□□□ -1.52
CAST-201ENST00000309190 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 PHF20L1A8MW92 1017 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 E9PMD0 336 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ORC4O43929 436 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 ATP9AO75110 1047 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 KIF20AO95235 890 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 CCT6AP40227 531 aaKnown RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 NCAPHQ15003 741 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 NONOQ15233 471 aaKnown RBP eCLIP5.54□□□□□ -1.52
CAST-201ENST00000309190 CALCRLQ16602 461 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SBK1Q52WX2 424 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 SEZ6Q53EL9 994 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 RGMBQ6NW40 437 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 USP50Q70EL3 339 aaPredicted RBP5.54□□□□□ -1.52
CAST-201ENST00000309190 SAPCD2Q86UD0 394 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 RABGGTAQ92696 567 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 BPIFA3Q9BQP9 254 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 COL20A1Q9P218 1284 aa5.54□□□□□ -1.52
CAST-201ENST00000309190 DDX25Q9UHL0 483 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms