RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 ANKRD26Q9UPS8 1709 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 KLRK1P26718 216 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 ATP2A1O14983 1001 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 N4BP1O75113 896 aaKnown RBP12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC91Q7Z6B0 441 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC25Q86WR0 208 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 KLHL7Q8IXQ5 586 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 TRERF1Q96PN7 1200 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 PANX2Q96RD6 677 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 PIM2Q9P1W9 311 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 ANAPC4Q9UJX5 808 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
PCDHGC3-201ENST00000308177 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 SOWAHDA6NJG2 315 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 SORBS3O60504 671 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 LRRC63Q05C16 580 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 DHX40Q8IX18 779 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 SLC35F6Q8N357 371 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC127Q96BQ5 260 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 HYOU1Q9Y4L1 999 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 BUB1O43683 1085 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 EZRP15311 586 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ABCB4P21439 1286 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZBED6P86452 979 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 DMP1Q13316 513 aaPredicted RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 UNC13DQ70J99 1090 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ADGRF4Q8IZF3 695 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 PP2D1A8MPX8 630 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 TCP1P17987 556 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 LIG4P49917 911 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC144BQ3MJ40 725 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 HOMEZQ8IX15 550 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 ATRIPQ8WXE1 791 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 BHMT2Q9H2M3 363 aa12.55□□□□□ -0.4
PCDHGC3-201ENST00000308177 H0YCG3 227 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 OSBPL5Q9H0X9 879 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 NDST4Q9H3R1 872 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 PRCPP42785 496 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 BRD3Q15059 726 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 NCAPG2Q86XI2 1143 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 POTEDQ86YR6 584 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 SPTLC3Q9NUV7 552 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM76AQ8TAV0 307 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 UBLCP1Q8WVY7 318 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 ACTN4O43707 911 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 RASA1P20936 1047 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 CHRNA5P30532 468 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 PSMC2P35998 433 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 IQCB1Q15051 598 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 AMFRQ9UKV5 643 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 C3P01024 1663 aa12.54□□□□□ -0.4
PCDHGC3-201ENST00000308177 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 CLIC2O15247 247 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 MFAP3LO75121 409 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 AFPP02771 609 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 IVLP07476 585 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 ARHGAP4P98171 946 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 MB21D1Q8N884 522 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 PHLPP2Q6ZVD8 1323 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 FAM170AA1A519 330 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 TROAPQ12815 778 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms