RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 NOC4LQ9BVI4 516 aaKnown RBP18.06■□□□□ 0.48
FANCA-201ENST00000305699 IL23AQ9NPF7 189 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
FANCA-201ENST00000305699 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 SCN10AQ9Y5Y9 1956 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 CYP2C9P11712 490 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 RXRAP19793 462 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 CCDC136Q96JN2 1154 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 LZTS2Q9BRK4 669 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
FANCA-201ENST00000305699 DDX41Q9UJV9 622 aaKnown RBP18.06■□□□□ 0.48
FANCA-201ENST00000305699 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.05■□□□□ 0.48
FANCA-201ENST00000305699 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.05■□□□□ 0.48
FANCA-201ENST00000305699 CDC45O75419 566 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 MMP3P08254 477 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 GNAQP50148 359 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 PGM5Q15124 567 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 NFRKBQ6P4R8 1299 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 RAB11FIP4Q86YS3 637 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 GUCD1Q96NT3 240 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 NOD1Q9Y239 953 aa18.05■□□□□ 0.48
FANCA-201ENST00000305699 PLEKHA8P1O95397 391 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 CALM1P0DP23 149 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 CALM2P0DP24 149 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 CALM3P0DP25 149 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
FANCA-201ENST00000305699 CCND2P30279 289 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 LIFRP42702 1097 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 COL9A3Q14050 684 aaPredicted RBP18.04■□□□□ 0.48
FANCA-201ENST00000305699 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
FANCA-201ENST00000305699 SLC17A8Q8NDX2 589 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 IL31RAQ8NI17 732 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 SCLYQ96I15 445 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 WNT8AQ9H1J5 351 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
FANCA-201ENST00000305699 SORBS3O60504 671 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 FGBP02675 491 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 LAMC2Q13753 1193 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 DGKDQ16760 1214 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 KCNV1Q6PIU1 500 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 VSIG10LQ86VR7 867 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 CMTR1Q8N1G2 835 aaKnown RBP18.03■□□□□ 0.48
FANCA-201ENST00000305699 CUL5Q93034 780 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
FANCA-201ENST00000305699 MTIF3Q9H2K0 278 aaKnown RBP18.03■□□□□ 0.48
FANCA-201ENST00000305699 SEMA6BQ9H3T3 888 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 MYH7BA7E2Y1 1941 aa18.03■□□□□ 0.48
FANCA-201ENST00000305699 RGS20O76081 388 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 DNAJB2P25686 324 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 PTPN11Q06124 597 aaPredicted RBP18.02■□□□□ 0.48
FANCA-201ENST00000305699 SYNE3Q6ZMZ3 975 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 RPUSD2Q8IZ73 545 aaKnown RBP18.02■□□□□ 0.48
FANCA-201ENST00000305699 SRBD1Q8N5C6 995 aaKnown RBP18.02■□□□□ 0.48
FANCA-201ENST00000305699 SMARCC2Q8TAQ2 1214 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 EMID1Q96A84 441 aaPredicted RBP18.02■□□□□ 0.48
FANCA-201ENST00000305699 NEK1Q96PY6 1258 aa18.02■□□□□ 0.48
FANCA-201ENST00000305699 TTYH1Q9H313 450 aaPredicted RBP18.02■□□□□ 0.48
FANCA-201ENST00000305699 GGPS1O95749 300 aa18.01■□□□□ 0.47
FANCA-201ENST00000305699 OTOP2Q7RTS6 562 aa18.01■□□□□ 0.47
FANCA-201ENST00000305699 MICU3Q86XE3 530 aa18.01■□□□□ 0.47
FANCA-201ENST00000305699 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
FANCA-201ENST00000305699 HERVK_113Q902F9 699 aa18.01■□□□□ 0.47
FANCA-201ENST00000305699 GRXCR1A8MXD5 290 aa18■□□□□ 0.47
FANCA-201ENST00000305699 PTGISQ16647 500 aa18■□□□□ 0.47
FANCA-201ENST00000305699 GNPTABQ3T906 1256 aa18■□□□□ 0.47
FANCA-201ENST00000305699 RASIP1Q5U651 963 aa18■□□□□ 0.47
FANCA-201ENST00000305699 USP17L6PQ6QN14 398 aa18■□□□□ 0.47
FANCA-201ENST00000305699 FANCBQ8NB91 859 aa18■□□□□ 0.47
FANCA-201ENST00000305699 RETREG2Q8NC44 543 aa18■□□□□ 0.47
FANCA-201ENST00000305699 PPTC7Q8NI37 304 aa18■□□□□ 0.47
FANCA-201ENST00000305699 SPATA33Q96N06 139 aa18■□□□□ 0.47
FANCA-201ENST00000305699 CDX2Q99626 313 aaPredicted RBP18■□□□□ 0.47
FANCA-201ENST00000305699 ALG1Q9BT22 464 aa18■□□□□ 0.47
FANCA-201ENST00000305699 TMEM265A0A087WTH1 108 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 ZBBXA8MT70 800 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 ZNF286BP0CG31 522 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 TGFB3P10600 412 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 UBA1P22314 1058 aaKnown RBP17.99■□□□□ 0.47
FANCA-201ENST00000305699 BFSP2Q13515 415 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 CELF3Q5SZQ8 465 aaKnown RBP17.99■□□□□ 0.47
FANCA-201ENST00000305699 MYSM1Q5VVJ2 828 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 DEFB128Q7Z7B8 93 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 SGMS1Q86VZ5 419 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 C7orf31Q8N865 590 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 KAT2BQ92831 832 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 GPKOWQ92917 476 aaPredicted RBP eCLIP17.99■□□□□ 0.47
FANCA-201ENST00000305699 TIFAQ96CG3 184 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 KATNAL1Q9BW62 490 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 MLXIPQ9HAP2 919 aa17.99■□□□□ 0.47
FANCA-201ENST00000305699 CXXC1Q9P0U4 656 aaPredicted RBP17.99■□□□□ 0.47
FANCA-201ENST00000305699 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
FANCA-201ENST00000305699 PSEN2P49810 448 aa17.98■□□□□ 0.47
FANCA-201ENST00000305699 MFSD10Q14728 455 aa17.98■□□□□ 0.47
FANCA-201ENST00000305699 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
FANCA-201ENST00000305699 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
FANCA-201ENST00000305699 DHX32Q7L7V1 743 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms