RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 IVNS1ABPQ9Y6Y0 642 aa10.82□□□□□ -0.68
RFX3-201ENST00000302303 MEIS1O00470 390 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 SLC37A4O43826 429 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 XRCC5P13010 732 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 CYP2B6P20813 491 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 TRAPPC10P48553 1259 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 DNM1Q05193 864 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 IRF5Q13568 498 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 FOXD4L6Q3SYB3 417 aaPredicted RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 TMEM63BQ5T3F8 832 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 ARHGEF16Q5VV41 709 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 PPP4R3AQ6IN85 833 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 FOXD4L3Q6VB84 417 aaPredicted RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 CLEC17AQ6ZS10 378 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 OTOP1Q7RTM1 612 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 DPP9Q86TI2 863 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 SOCS4Q8WXH5 440 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 INPP4AQ96PE3 977 aaPredicted RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 TMEM60Q9H2L4 133 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 TFIP11Q9UBB9 837 aaKnown RBP10.81□□□□□ -0.68
RFX3-201ENST00000302303 PLXNA1Q9UIW2 1896 aa10.81□□□□□ -0.68
RFX3-201ENST00000302303 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 ARP10275 920 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
RFX3-201ENST00000302303 ZNF174Q15697 407 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 IL17AQ16552 155 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 LETM2Q2VYF4 491 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 Q4G0T1 1027 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 RILPL1Q5EBL4 403 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 OLFML2BQ68BL8 750 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 TAPT1Q6NXT6 567 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 MOXD1Q6UVY6 613 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 TRIB2Q92519 343 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 HAS1Q92839 578 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 MTMR9Q96QG7 549 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 MXRA8Q9BRK3 442 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 TINF2Q9BSI4 451 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 WDR11Q9BZH6 1224 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 BCAS3Q9H6U6 928 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 JADE2Q9NQC1 790 aa10.8□□□□□ -0.68
RFX3-201ENST00000302303 ADD3Q9UEY8 706 aaKnown RBP10.8□□□□□ -0.68
RFX3-201ENST00000302303 BRCA2P51587 3418 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ATP9AO75110 1047 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 GNRH1P01148 92 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 MYCLP12524 364 aaPredicted RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 RGS2P41220 211 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 NASPP49321 788 aaPredicted RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 SP2Q02086 613 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 TRIM32Q13049 653 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 CEP55Q53EZ4 464 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 PRAMEF19Q5SWL8 479 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 XRRA1Q6P2D8 792 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 TRPV1Q8NER1 839 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ETNPPLQ8TBG4 499 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 GJA10Q969M2 543 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 APBA2Q99767 749 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 KCNMB3Q9NPA1 279 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 PDGFCQ9NRA1 345 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 SYNGAP1Q96PV0 1343 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 RBM47A0AV96 593 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 SPATA31C2B4DYI2 1134 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 MSH4O15457 936 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 DHX15O43143 795 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 ADCY6O43306 1168 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 CCNT1O60563 726 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 EIF3JO75822 258 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 ARIH2O95376 493 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ZNF865P0CJ78 1059 aaPredicted RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 PTGS1P23219 599 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 CCND2P30279 289 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ICAM3P32942 547 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 CYP2C19P33261 490 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 MCM7P33993 719 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 LBX1P52954 281 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 GNL2Q13823 731 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 KIF22Q14807 665 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 STXBP2Q15833 593 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 ANO1Q5XXA6 986 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 CCDC62Q6P9F0 684 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 B3GNT9Q6UX72 402 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 NIPA1Q7RTP0 329 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 MSL3Q8N5Y2 521 aaKnown RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 LINC00301Q8NCQ3 95 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 KCNH7Q9NS40 1196 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 POLR3EQ9NVU0 708 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
RFX3-201ENST00000302303 RCOR1Q9UKL0 485 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 TELO2Q9Y4R8 837 aa10.79□□□□□ -0.68
RFX3-201ENST00000302303 MCM3APO60318 1980 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms