RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 CAVIN3Q969G5 261 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 RCAN1P53805 252 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 GSCP56915 257 aaPredicted RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 CYB5D1Q6P9G0 228 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 UHMK1Q8TAS1 419 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 DYDC1Q8WWB3 177 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 RSRC1Q96IZ7 334 aaKnown RBP12.56□□□□□ -0.4
TRUB1-201ENST00000298746 TRIM9Q9C026 710 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
TRUB1-201ENST00000298746 MAGOHP61326 146 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 ANKS4BQ8N8V4 417 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 MAGOHBQ96A72 148 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 NKRFO15226 690 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 PDE6BP35913 854 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 PEX19P40855 299 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 NAALADL2Q58DX5 795 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 KLHDC7AQ5VTJ3 777 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 IQCKQ8N0W5 287 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 SEPT11Q9NVA2 429 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 FAM205AQ6ZU69 1335 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 KRIT1O00522 736 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 KIF1CO43896 1103 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 KLRC1P26715 233 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 TFAP4Q01664 338 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
TRUB1-201ENST00000298746 CCDC50Q8IVM0 306 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 ERGIC2Q96RQ1 377 aa12.55□□□□□ -0.4
TRUB1-201ENST00000298746 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 CYP2D6P10635 497 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 PRLRP16471 622 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 PNMA1Q8ND90 353 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 TACO1Q9BSH4 297 aaKnown RBP12.54□□□□□ -0.4
TRUB1-201ENST00000298746 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
TRUB1-201ENST00000298746 TAF1DQ9H5J8 278 aaPredicted RBP12.54□□□□□ -0.4
TRUB1-201ENST00000298746 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 IL2RBP14784 551 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 FNTAP49354 379 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
TRUB1-201ENST00000298746 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 SEC16BQ96JE7 1060 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
TRUB1-201ENST00000298746 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 FBXL5Q9UKA1 691 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
TRUB1-201ENST00000298746 RAD21O60216 631 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 IFNAR2P48551 515 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 HVCN1Q96D96 273 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 KLRC4O43908 158 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 HSD17B3P37058 310 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 EVX2Q03828 476 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 FUT2Q10981 343 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 TBC1D1Q86TI0 1168 aaPredicted RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 RUBCNQ92622 972 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 RASSF10A6NK89 507 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 SLC8A1P32418 973 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 PPP1R2P41236 205 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 ITIH3Q06033 890 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 ASIC2Q16515 512 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 TMEM266Q2M3C6 531 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 MIIPQ5JXC2 388 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms