RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 GLMNQ92990 594 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 ZNF274Q96GC6 653 aaPredicted RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 UCN2Q96RP3 112 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 PORCNQ9H237 461 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 RIOX1Q9H6W3 641 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 UPF2Q9HAU5 1272 aaKnown RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 MORF4L1Q9UBU8 362 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 RIPK3Q9Y572 518 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 SLC12A7Q9Y666 1083 aa6.86□□□□□ -1.31
SSX3-201ENST00000298396 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
SSX3-201ENST00000298396 OPLAHO14841 1288 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 ADAMTS3O15072 1205 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 HSPA1AP0DMV8 641 aaKnown RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 HSPA1BP0DMV9 641 aaKnown RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 CALM1P0DP23 149 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 CALM2P0DP24 149 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 CALM3P0DP25 149 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 GRM5P41594 1212 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 METAP2P50579 478 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSX3-201ENST00000298396 MAP2K1Q02750 393 aaPredicted RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 PABPC4Q13310 644 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSX3-201ENST00000298396 AGERQ15109 404 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 RTN1Q16799 776 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 FAM110CQ1W6H9 321 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 QRICH1Q2TAL8 776 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 OTUD7BQ6GQQ9 843 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 CCDC174Q6PII3 467 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 PRPF38AQ8NAV1 312 aaKnown RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 CHURC1Q8WUH1 139 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 GTF3C6Q969F1 213 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 PIGSQ96S52 555 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 PAGR1Q9BTK6 254 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 MOV10L1Q9BXT6 1211 aaKnown RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 ZFYVE28Q9HCC9 887 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 RAVER2Q9HCJ3 691 aaKnown RBP6.85□□□□□ -1.31
SSX3-201ENST00000298396 RABGAP1Q9Y3P9 1069 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 BRCA2P51587 3418 aa6.85□□□□□ -1.31
SSX3-201ENST00000298396 GPR25O00155 361 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 ATP2A1O14983 1001 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 JAK2O60674 1132 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 FDPSP14324 419 aaKnown RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 GCLCP48506 637 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 FGD1P98174 961 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 IKQ13123 557 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 PKN1Q16512 942 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 NBPF20Q3BBV1 942 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 NOM1Q5C9Z4 860 aaKnown RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 MUM1L1Q5H9M0 696 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 CCDC82Q8N4S0 544 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 MB21D1Q8N884 522 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 NSUN7Q8NE18 718 aaKnown RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 CTCFLQ8NI51 663 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 CD99L2Q8TCZ2 262 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 SMCR8Q8TEV9 937 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 PIBF1Q8WXW3 757 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 PHKBQ93100 1093 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 TRIM47Q96LD4 638 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 AIFM3Q96NN9 605 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 SPATC1LQ9H0A9 340 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 EFCC1Q9HA90 598 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 VAT1LQ9HCJ6 419 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 RBM28Q9NW13 759 aaKnown RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 HOXC10Q9NYD6 342 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 ISY1Q9ULR0 285 aaKnown RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 NAP1L2Q9ULW6 460 aaPredicted RBP6.84□□□□□ -1.31
SSX3-201ENST00000298396 LIMCH1Q9UPQ0 1083 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
SSX3-201ENST00000298396 ASTN1O14525 1302 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 NFIBO00712 420 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 ADH1CP00326 375 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 ICAM1P05362 532 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 IFNAR1P17181 557 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 ERCC3P19447 782 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 SMARCA1P28370 1054 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 KIF5BP33176 963 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 LACTBP83111 547 aaPredicted RBP6.83□□□□□ -1.32
SSX3-201ENST00000298396 ANKRD1Q15327 319 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 INTS6LQ5JSJ4 861 aaKnown RBP6.83□□□□□ -1.32
SSX3-201ENST00000298396 WWC2Q6AWC2 1192 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 SNRNP48Q6IEG0 339 aaKnown RBP6.83□□□□□ -1.32
SSX3-201ENST00000298396 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 RIOX2Q8IUF8 465 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 CCDC83Q8IWF9 413 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 CPXCR1Q8N123 301 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 GPRC5AQ8NFJ5 357 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 SNIP1Q8TAD8 396 aaKnown RBP6.83□□□□□ -1.32
SSX3-201ENST00000298396 GTF3C2Q8WUA4 911 aaPredicted RBP6.83□□□□□ -1.32
SSX3-201ENST00000298396 CLEC4DQ8WXI8 215 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 TBC1D5Q92609 795 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 USP6NLQ92738 828 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 COA7Q96BR5 231 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 TMX3Q96JJ7 454 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 FGD4Q96M96 766 aa6.83□□□□□ -1.32
SSX3-201ENST00000298396 GJD2Q9UKL4 321 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms