RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 SMYD4Q8IYR2 804 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-202ENST00000297979 ETNPPLQ8TBG4 499 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 TBC1D5Q92609 795 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 AGBL1Q96MI9 1066 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
C9orf3-202ENST00000297979 RPAP3Q9H6T3 665 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-202ENST00000297979 EHMT1Q9H9B1 1298 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 PHIPQ8WWQ0 1821 aa16.01■□□□□ 0.15
C9orf3-202ENST00000297979 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
C9orf3-202ENST00000297979 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 AMPD3Q01432 767 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 LENG9Q96B70 501 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 FAM86B1E9PN63 330 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 FAM86B2P0C5J1 330 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 TMEM119Q4V9L6 283 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
C9orf3-202ENST00000297979 KLHL10Q6JEL2 608 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 MED15Q96RN5 788 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 SLC38A10Q9HBR0 1119 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 KLRC4O43908 158 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 PTGS1P23219 599 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 ZNF76P36508 570 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 NUDT12Q9BQG2 462 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 TRIM9Q9C026 710 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
C9orf3-202ENST00000297979 PARP14Q460N5 1801 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 SERPINC1P01008 464 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 CLCN1P35523 988 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 KMT5BQ4FZB7 885 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 SV2BQ7L1I2 683 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 DCPSQ96C86 337 aaKnown RBP15.99■□□□□ 0.15
C9orf3-202ENST00000297979 FAM20AQ96MK3 541 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 SLC26A4O43511 780 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 ZNF18P17022 549 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 SPATA1Q5VX52 437 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.99■□□□□ 0.15
C9orf3-202ENST00000297979 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
C9orf3-202ENST00000297979 C12orf42Q96LP6 360 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
C9orf3-202ENST00000297979 C19orf81C9J6K1 198 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 CBFA2T2O43439 604 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 RHOBTB3O94955 611 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 HSD17B4P51659 736 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 HYIQ5T013 277 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 RAD54LQ92698 747 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 CCDC47Q96A33 483 aaKnown RBP15.98■□□□□ 0.15
C9orf3-202ENST00000297979 UIMC1Q96RL1 719 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 PNMA2Q9UL42 364 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 FDX1P10109 184 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 CCT6AP40227 531 aaKnown RBP15.98■□□□□ 0.15
C9orf3-202ENST00000297979 ASIC1P78348 528 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 SULF1Q8IWU6 871 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 CPXCR1Q8N123 301 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 NT5C3AQ9H0P0 336 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 RAVER2Q9HCJ3 691 aaKnown RBP15.98■□□□□ 0.15
C9orf3-202ENST00000297979 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
C9orf3-202ENST00000297979 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
C9orf3-202ENST00000297979 RBBP6Q7Z6E9 1792 aaKnown RBP15.98■□□□□ 0.15
C9orf3-202ENST00000297979 ZBED4O75132 1171 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 HMGCS2P54868 508 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 STX17P56962 302 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 UBASH3AP57075 661 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 DHX8Q14562 1220 aaKnown RBP15.97■□□□□ 0.15
C9orf3-202ENST00000297979 MCM6Q14566 821 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 CLEC4DQ8WXI8 215 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 IGLV3-22A0A075B6J6 115 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 MSH4O15457 936 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 ZNF500O60304 480 aaPredicted RBP15.97■□□□□ 0.15
C9orf3-202ENST00000297979 ALAS1P13196 640 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 SPIRE1Q08AE8 756 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 PAK1Q13153 545 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 PRKG1Q13976 671 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 RWDD2AQ9UIY3 292 aa15.97■□□□□ 0.15
C9orf3-202ENST00000297979 NFIBO00712 420 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 USP2O75604 605 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-202ENST00000297979 GHRHRQ02643 423 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 HAUS3Q68CZ6 603 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 CYP2W1Q8TAV3 490 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 SAMSN1Q9NSI8 373 aaKnown RBP15.96■□□□□ 0.15
C9orf3-202ENST00000297979 EXOC1Q9NV70 894 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 UTRNP46939 3433 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 STAT3P40763 770 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 PRCPP42785 496 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 ECM1Q16610 540 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 HSP90AA4PQ58FG1 418 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 DPY19L2Q6NUT2 758 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 KCNK18Q7Z418 384 aa15.96■□□□□ 0.15
C9orf3-202ENST00000297979 GIMAP8Q8ND71 665 aaPredicted RBP15.96■□□□□ 0.15
C9orf3-202ENST00000297979 ERMNQ8TAM6 284 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms