RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 USP17L5A8MUK1 530 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 KRT14P02533 472 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 NFIAQ12857 509 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 SHROOM1Q2M3G4 852 aaPredicted RBP13.83□□□□□ -0.2
CAGE1-201ENST00000296742 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
CAGE1-201ENST00000296742 RRAGBQ5VZM2 374 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 BLIDQ8IZY5 108 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 TSEN2Q8NCE0 465 aaKnown RBP13.83□□□□□ -0.2
CAGE1-201ENST00000296742 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 DUSP10Q9Y6W6 482 aa13.83□□□□□ -0.2
CAGE1-201ENST00000296742 PP2D1A8MPX8 630 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 KRT86O43790 486 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 HSF2BPO75031 334 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 GUCY1A3Q02108 690 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 GRM4Q14833 912 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 ZFPM1Q8IX07 1006 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 OR8K1Q8NGG5 319 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 PSMB7Q99436 277 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 LACRTQ9GZZ8 138 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
CAGE1-201ENST00000296742 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 USP40Q9NVE5 1235 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 ODF2LQ9ULJ1 636 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 KCNJ18B7U540 433 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
CAGE1-201ENST00000296742 TRIM14Q14142 442 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 LUC7L2Q9Y383 392 aaKnown RBP13.82□□□□□ -0.2
CAGE1-201ENST00000296742 AKR1B1P15121 316 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC40Q4G0X9 1142 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 CEP85LQ5SZL2 805 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 NAA35Q5VZE5 725 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 MICALCLQ6ZW33 695 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
CAGE1-201ENST00000296742 PDGFDQ9GZP0 370 aaPredicted RBP13.82□□□□□ -0.2
CAGE1-201ENST00000296742 SNED1Q8TER0 1413 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 NPR1P16066 1061 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 CDR1P51861 262 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 SEC24CP53992 1094 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 SATB1Q01826 763 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 IFT88Q13099 833 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 NNTQ13423 1086 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 ZNF579Q8NAF0 562 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 COA1Q9GZY4 146 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 MCM8Q9UJA3 840 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 MPHOSPH10O00566 681 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 C21orf2O43822 256 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 LSP1P33241 339 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 SKOR1P84550 965 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 APBA1Q02410 837 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 TCP11X2Q5H9J9 407 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
CAGE1-201ENST00000296742 PIGSQ96S52 555 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 TMEM60Q9H2L4 133 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 SMARCAL1Q9NZC9 954 aa13.81□□□□□ -0.2
CAGE1-201ENST00000296742 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 GAKO14976 1311 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PLCG2P16885 1265 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 KRT83P78385 493 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 ATP2C1P98194 919 aaPredicted RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC13Q8IYE1 715 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 GSDMAQ96QA5 445 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PCDHA6Q9UN73 950 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PCDHA4Q9UN74 947 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PCDHA8Q9Y5H6 950 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 NEBLO76041 1014 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 NAPAP54920 295 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 SPAG1Q07617 926 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 PREPLQ4J6C6 727 aaPredicted RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 C2CD5Q86YS7 1000 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 ZIM3Q96PE6 472 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 UIMC1Q96RL1 719 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.8□□□□□ -0.2
CAGE1-201ENST00000296742 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
CAGE1-201ENST00000296742 DLEC1Q9Y238 1755 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 STXBP3O00186 592 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 CXCR5P32302 372 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 PAK1Q13153 545 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms