RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 TADA3O75528 432 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 CYP3A7P24462 503 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 ARHGAP29Q52LW3 1261 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 MOXD1Q6UVY6 613 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 ATRIPQ8WXE1 791 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 MBOAT7Q96N66 472 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 FEZ1Q99689 392 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 MEIS2O14770 477 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 C21orf2O43822 256 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 EHHADHQ08426 723 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 PSMD2Q13200 908 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 FBXO11Q86XK2 927 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 NOC4LQ9BVI4 516 aaKnown RBP26.72■■□□□ 1.87
TRIM54-201ENST00000296098 IRX2Q9BZI1 471 aaPredicted RBP26.72■■□□□ 1.87
TRIM54-201ENST00000296098 TMOD2Q9NZR1 351 aa26.72■■□□□ 1.87
TRIM54-201ENST00000296098 SLC26A4O43511 780 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 BMP3P12645 472 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 JAG1P78504 1218 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 TBC1D8BQ0IIM8 1120 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 MIIPQ5JXC2 388 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
TRIM54-201ENST00000296098 UBXN4Q92575 508 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 NUP58Q9BVL2 599 aa26.71■■□□□ 1.87
TRIM54-201ENST00000296098 EFCAB8A8MWE9 144 aa26.7■■□□□ 1.87
TRIM54-201ENST00000296098 SNAP25P60880 206 aa26.7■■□□□ 1.87
TRIM54-201ENST00000296098 TSR1Q2NL82 804 aaKnown RBP26.7■■□□□ 1.87
TRIM54-201ENST00000296098 RETREG2Q8NC44 543 aa26.7■■□□□ 1.87
TRIM54-201ENST00000296098 LRRC63Q05C16 580 aa26.7■■□□□ 1.86
TRIM54-201ENST00000296098 EZH2Q15910 746 aaKnown RBP26.7■■□□□ 1.86
TRIM54-201ENST00000296098 SLFN12Q8IYM2 578 aa26.7■■□□□ 1.86
TRIM54-201ENST00000296098 TTYH3Q9C0H2 523 aa26.7■■□□□ 1.86
TRIM54-201ENST00000296098 HERC5Q9UII4 1024 aaKnown RBP26.7■■□□□ 1.86
TRIM54-201ENST00000296098 SYNPO2Q9UMS6 1093 aa26.7■■□□□ 1.86
TRIM54-201ENST00000296098 FGFR1OPO95684 399 aaKnown RBP26.69■■□□□ 1.86
TRIM54-201ENST00000296098 TRIM21P19474 475 aaKnown RBP26.69■■□□□ 1.86
TRIM54-201ENST00000296098 ARHGAP4P98171 946 aa26.69■■□□□ 1.86
TRIM54-201ENST00000296098 PPP2R3AQ06190 1150 aa26.69■■□□□ 1.86
TRIM54-201ENST00000296098 RRP1BQ14684 758 aaKnown RBP26.69■■□□□ 1.86
TRIM54-201ENST00000296098 USH1GQ495M9 461 aa26.69■■□□□ 1.86
TRIM54-201ENST00000296098 CRYGNQ8WXF5 182 aa26.69■■□□□ 1.86
TRIM54-201ENST00000296098 SLF1Q9BQI6 1058 aa26.69■■□□□ 1.86
TRIM54-201ENST00000296098 FKBP15Q5T1M5 1219 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 BTNL9Q6UXG8 535 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 DNAJC19Q96DA6 116 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 CHP1Q99653 195 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 SPDYE2BA6NHP3 402 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 NDUFA10O95299 355 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 SPDYE6P0CI01 402 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 COASYQ13057 564 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 RSBN1LQ6PCB5 846 aaPredicted RBP26.68■■□□□ 1.86
TRIM54-201ENST00000296098 ERGIC2Q96RQ1 377 aa26.68■■□□□ 1.86
TRIM54-201ENST00000296098 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.68■■□□□ 1.86
TRIM54-201ENST00000296098 H2AFXP16104 143 aaPredicted RBP26.67■■□□□ 1.86
TRIM54-201ENST00000296098 GRIPAP1Q4V328 841 aa26.67■■□□□ 1.86
TRIM54-201ENST00000296098 ZNF569Q5MCW4 686 aa26.67■■□□□ 1.86
TRIM54-201ENST00000296098 BMP2KQ9NSY1 1161 aaPredicted RBP26.67■■□□□ 1.86
TRIM54-201ENST00000296098 EPN1Q9Y6I3 576 aaPredicted RBP26.67■■□□□ 1.86
TRIM54-201ENST00000296098 ABCB11O95342 1321 aa26.67■■□□□ 1.86
TRIM54-201ENST00000296098 TCP10L2B9ZVM9 353 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 FOSP01100 380 aaPredicted RBP26.66■■□□□ 1.86
TRIM54-201ENST00000296098 SSBP05455 408 aaKnown RBP eCLIP26.66■■□□□ 1.86
TRIM54-201ENST00000296098 MMP14P50281 582 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 FOXR2Q6PJQ5 311 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 PCMTD1Q96MG8 357 aaPredicted RBP26.66■■□□□ 1.86
TRIM54-201ENST00000296098 UIMC1Q96RL1 719 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 CAMKK2Q96RR4 588 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 P2RX7Q99572 595 aaKnown RBP26.66■■□□□ 1.86
TRIM54-201ENST00000296098 TSG101Q99816 390 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 KIAA1024Q9UPX6 916 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 A0A1W2PRG0 241 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 POTEB3A0JP26 581 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 SPDYE3A6NKU9 549 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 POTECB2RU33 542 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 ARHGAP25P42331 645 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 KLK7P49862 253 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 EN1Q05925 392 aaPredicted RBP26.66■■□□□ 1.86
TRIM54-201ENST00000296098 MEA1Q16626 185 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 POTEBQ6S5H4 581 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 ETNPPLQ8TBG4 499 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 PANK4Q9NVE7 773 aa26.66■■□□□ 1.86
TRIM54-201ENST00000296098 RASSF10A6NK89 507 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 SPDYE4A6NLX3 237 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 E9PMD0 336 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 SREBF1P36956 1147 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 ZBED6P86452 979 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 FIGNQ5HY92 759 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 HAUS3Q68CZ6 603 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 WDR59Q6PJI9 974 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 IQCDQ96DY2 449 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 MYO1AQ9UBC5 1043 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 CLRN2A0PK11 232 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 TBX3O15119 743 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 PLA2G4BP0C869 781 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 Q4G0T1 1027 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 VWA3BQ502W6 1294 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 PRR16Q569H4 304 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 FAM26FQ5R3K3 315 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 MYOCDQ8IZQ8 938 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 ARHGEF10LQ9HCE6 1279 aa26.65■■□□□ 1.86
TRIM54-201ENST00000296098 DDX41Q9UJV9 622 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms