RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 MORC4Q8TE76 937 aa18.09■□□□□ 0.49
MRPL55-201ENST00000295008 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
MRPL55-201ENST00000295008 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
MRPL55-201ENST00000295008 B4DLN1 442 aa18.08■□□□□ 0.48
MRPL55-201ENST00000295008 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.48
MRPL55-201ENST00000295008 XRCC5P13010 732 aaKnown RBP18.08■□□□□ 0.48
MRPL55-201ENST00000295008 CTCFP49711 727 aaPredicted RBP18.08■□□□□ 0.48
MRPL55-201ENST00000295008 MAMDC4Q6UXC1 1216 aa18.08■□□□□ 0.48
MRPL55-201ENST00000295008 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
MRPL55-201ENST00000295008 FTOQ9C0B1 505 aaKnown RBP eCLIP18.08■□□□□ 0.48
MRPL55-201ENST00000295008 TRIM17Q9Y577 477 aa18.08■□□□□ 0.48
MRPL55-201ENST00000295008 SYNGAP1Q96PV0 1343 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 DOCK3Q8IZD9 2030 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 FAM86B1E9PN63 330 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 FAM86B2P0C5J1 330 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 CIITAP33076 1130 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 ZNF76P36508 570 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 LBX1P52954 281 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 IRF5Q13568 498 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 STXBP2Q15833 593 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 OLFML2BQ68BL8 750 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 MOXD1Q6UVY6 613 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 MSL3Q8N5Y2 521 aaKnown RBP18.07■□□□□ 0.48
MRPL55-201ENST00000295008 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 NAP1L4Q99733 375 aaKnown RBP18.07■□□□□ 0.48
MRPL55-201ENST00000295008 TINF2Q9BSI4 451 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.07■□□□□ 0.48
MRPL55-201ENST00000295008 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
MRPL55-201ENST00000295008 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 SLC37A4O43826 429 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 STAM2O75886 525 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 GCFC2P16383 781 aaKnown RBP18.06■□□□□ 0.48
MRPL55-201ENST00000295008 ITGB5P18084 799 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 CYP3A7P24462 503 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 MCM7P33993 719 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 PRMT2P55345 433 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
MRPL55-201ENST00000295008 ZNF174Q15697 407 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 PPP4R3AQ6IN85 833 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 CYP2W1Q8TAV3 490 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 TRIB2Q92519 343 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 MBOAT7Q96N66 472 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 ZNF396Q96N95 335 aaPredicted RBP18.06■□□□□ 0.48
MRPL55-201ENST00000295008 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
MRPL55-201ENST00000295008 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.06■□□□□ 0.48
MRPL55-201ENST00000295008 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
MRPL55-201ENST00000295008 MCM3APO60318 1980 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 IGLV3-22A0A075B6J6 115 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 EIF3JO75822 258 aaKnown RBP18.05■□□□□ 0.48
MRPL55-201ENST00000295008 RGS20O76081 388 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 SNAI1O95863 264 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-201ENST00000295008 IGHA2P01877 340 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 CEP55Q53EZ4 464 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 PRR16Q569H4 304 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 EEPD1Q7L9B9 569 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 FBXO16Q8IX29 292 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-201ENST00000295008 RAET1EQ8TD07 263 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
MRPL55-201ENST00000295008 LENG9Q96B70 501 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 INPP4AQ96PE3 977 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-201ENST00000295008 USP28Q96RU2 1077 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 CLIC4Q9Y696 253 aa18.05■□□□□ 0.48
MRPL55-201ENST00000295008 MEIS1O00470 390 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 ADCY3O60266 1144 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 NEMFO60524 1076 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 ELNP15502 786 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 CYP2C19P33261 490 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-201ENST00000295008 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
MRPL55-201ENST00000295008 ORC2Q13416 577 aaPredicted RBP18.04■□□□□ 0.48
MRPL55-201ENST00000295008 Q4G0T1 1027 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 ANO1Q5XXA6 986 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 PLA2G4DQ86XP0 818 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 TRMT44Q8IYL2 757 aaKnown RBP18.04■□□□□ 0.48
MRPL55-201ENST00000295008 WDR11Q9BZH6 1224 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 KATNBL1Q9H079 304 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 JADE2Q9NQC1 790 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 PTCH2Q9Y6C5 1203 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 KIAA1217Q5T5P2 1943 aa18.04■□□□□ 0.48
MRPL55-201ENST00000295008 MTMR1Q13613 665 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
MRPL55-201ENST00000295008 GNPTABQ3T906 1256 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 ATL3Q6DD88 541 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 NLRX1Q86UT6 975 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 GPRASP2Q96D09 838 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 VTA1Q9NP79 307 aa18.03■□□□□ 0.48
MRPL55-201ENST00000295008 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
MRPL55-201ENST00000295008 ARP10275 920 aa18.02■□□□□ 0.48
MRPL55-201ENST00000295008 NCLP19338 710 aaKnown RBP18.02■□□□□ 0.48
MRPL55-201ENST00000295008 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-201ENST00000295008 KRT85P78386 507 aa18.02■□□□□ 0.48
MRPL55-201ENST00000295008 TRIM32Q13049 653 aa18.02■□□□□ 0.48
MRPL55-201ENST00000295008 SEMA3FQ13275 785 aa18.02■□□□□ 0.48
MRPL55-201ENST00000295008 MFSD14CQ5VZR4 134 aa18.02■□□□□ 0.48
MRPL55-201ENST00000295008 SEPT14Q6ZU15 432 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms