RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 XPOTO43592 962 aaKnown RBP13.96□□□□□ -0.18
PTCD1-201ENST00000292478 PIK3CAP42336 1068 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 RESP18Q5W5W9 173 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 MAP7D3Q8IWC1 876 aa13.96□□□□□ -0.18
PTCD1-201ENST00000292478 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.18
PTCD1-201ENST00000292478 NR5A1Q13285 461 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 ZSCAN26Q16670 478 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 SUSD4Q5VX71 490 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 DCPSQ96C86 337 aaKnown RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 PBKQ96KB5 322 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 DLATP10515 647 aaKnown RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 DPY19L2Q6NUT2 758 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 MIS18BP1Q6P0N0 1132 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 VCXQ9H320 206 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 NRBP1Q9UHY1 535 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 EPHB4P54760 987 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 BFSP1Q12934 665 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 CCDC13Q8IYE1 715 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 ARHGEF2Q92974 986 aaKnown RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 RAB3IPQ96QF0 476 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 BUB1BO60566 1050 aaPredicted RBP13.95□□□□□ -0.18
PTCD1-201ENST00000292478 IGKV5-2P06315 115 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 STAT2P52630 851 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 RINT1Q6NUQ1 792 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
PTCD1-201ENST00000292478 MYO1FO00160 1098 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PCK1P35558 622 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 MCAMP43121 646 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 EHHADHQ08426 723 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 ALX1Q15699 326 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PHLDB2Q86SQ0 1253 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 NACA2Q9H009 215 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 BCS1LQ9Y276 419 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 JRKLQ9Y4A0 524 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 IFNB1P01574 187 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 NPR1P16066 1061 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PROCA1Q8NCQ7 364 aaPredicted RBP13.94□□□□□ -0.18
PTCD1-201ENST00000292478 CHAMP1Q96JM3 812 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 SERPING1P05155 500 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 SEMA3FQ13275 785 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 SULF1Q8IWU6 871 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 BPIFA3Q9BQP9 254 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 HNRNPDLO14979 420 aaKnown RBP13.94□□□□□ -0.18
PTCD1-201ENST00000292478 CCND2P30279 289 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 CCNA1P78396 465 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 TOB2Q14106 344 aaPredicted RBP13.94□□□□□ -0.18
PTCD1-201ENST00000292478 MAP3K21Q5TCX8 1036 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 GADL1Q6ZQY3 521 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PPP4R1Q8TF05 950 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
PTCD1-201ENST00000292478 PALM3A6NDB9 673 aaPredicted RBP13.93□□□□□ -0.18
PTCD1-201ENST00000292478 CDK8P49336 464 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 NCAPG2Q86XI2 1143 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 CTAGE3PQ8IX95 158 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 SLC7A3Q8WY07 619 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 IRX5P78411 483 aaPredicted RBP13.93□□□□□ -0.18
PTCD1-201ENST00000292478 MED10Q9BTT4 135 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 DPH5Q9H2P9 285 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 QTRT2Q9H974 415 aaKnown RBP13.93□□□□□ -0.18
PTCD1-201ENST00000292478 PODXL2Q9NZ53 605 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 USP17L8P0C7I0 530 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 SUPT20HL1Q3ZLR7 823 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 KMT5AQ9NQR1 393 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 CYP27B1O15528 508 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 IRX4P78413 519 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 GUCY2DQ02846 1103 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 KCTD2Q14681 263 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 DISC1Q9NRI5 854 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 PTPREP23469 700 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
PTCD1-201ENST00000292478 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 PGRMC1O00264 195 aaKnown RBP13.92□□□□□ -0.18
PTCD1-201ENST00000292478 CAPN9O14815 690 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 PLA2G4BP0C869 781 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 PLCG1P19174 1290 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 GDAP1L1Q96MZ0 367 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
PTCD1-201ENST00000292478 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 SURF1Q15526 300 aa13.92□□□□□ -0.18
PTCD1-201ENST00000292478 SCYL2Q6P3W7 929 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms