RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 ACRP10323 421 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 PGM5Q15124 567 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 NBPF20Q3BBV1 942 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 NFRKBQ6P4R8 1299 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 VSIG10LQ86VR7 867 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
SNF8-201ENST00000290330 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 WNT8AQ9H1J5 351 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
SNF8-201ENST00000290330 MMP3P08254 477 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 CYP2C9P11712 490 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
SNF8-201ENST00000290330 KIF5BP33176 963 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 LIFRP42702 1097 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 CCL23P55773 120 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 FAM47CQ5HY64 1035 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
SNF8-201ENST00000290330 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 IL31RAQ8NI17 732 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 PPP1R13LQ8WUF5 828 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 PIBF1Q8WXW3 757 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 TTYH1Q9H313 450 aaPredicted RBP12.11□□□□□ -0.47
SNF8-201ENST00000290330 SEMA6BQ9H3T3 888 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 MYH6P13533 1939 aa12.11□□□□□ -0.47
SNF8-201ENST00000290330 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 PLEKHA8P1O95397 391 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 FGBP02675 491 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 CALM1P0DP23 149 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 CALM2P0DP24 149 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 CALM3P0DP25 149 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 RXRAP19793 462 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
SNF8-201ENST00000290330 GNAQP50148 359 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 PTPN11Q06124 597 aaPredicted RBP12.1□□□□□ -0.47
SNF8-201ENST00000290330 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 SRBD1Q8N5C6 995 aaKnown RBP12.1□□□□□ -0.47
SNF8-201ENST00000290330 KAT2BQ92831 832 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
SNF8-201ENST00000290330 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
SNF8-201ENST00000290330 SCLYQ96I15 445 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 LZTS2Q9BRK4 669 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
SNF8-201ENST00000290330 BAZ2BQ9UIF8 2168 aaKnown RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 CDC45O75419 566 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 DNAJB2P25686 324 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 DGKDQ16760 1214 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 DHX37Q8IY37 1157 aaKnown RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 CMTR1Q8N1G2 835 aaKnown RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 SLC17A8Q8NDX2 589 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
SNF8-201ENST00000290330 SLC12A7Q9Y666 1083 aa12.09□□□□□ -0.47
SNF8-201ENST00000290330 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 TGFB3P10600 412 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
SNF8-201ENST00000290330 CCND2P30279 289 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
SNF8-201ENST00000290330 SP2Q02086 613 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 TSGA10IPQ3SY00 556 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
SNF8-201ENST00000290330 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 OTOP2Q7RTS6 562 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 SESTD1Q86VW0 696 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 RAB11FIP4Q86YS3 637 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 RASEFQ8IZ41 740 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
SNF8-201ENST00000290330 FANCBQ8NB91 859 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 CTAGE1Q96RT6 745 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
SNF8-201ENST00000290330 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 MEIS2O14770 477 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 GGPS1O95749 300 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 F2P00734 622 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 PFKMP08237 780 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 UBA1P22314 1058 aaKnown RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 PBX2P40425 430 aa12.07□□□□□ -0.48
SNF8-201ENST00000290330 EXOSC10Q01780 885 aaKnown RBP12.07□□□□□ -0.48
SNF8-201ENST00000290330 PTGISQ16647 500 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms