RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PFKFB1P16118 471 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 PIK3AP1Q6ZUJ8 805 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 STAG1Q8WVM7 1258 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 TCP11Q8WWU5 503 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF131P52739 623 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 SMTNP53814 917 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 TBC1D5Q92609 795 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 MCUR1Q96AQ8 359 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 PARK7Q99497 189 aaKnown RBP12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CHMP2AO43633 222 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
NPC1L1-201ENST00000289547 C19orf81C9J6K1 198 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 PLCD1P51178 756 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 TRIM4Q9C037 500 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 ABCB6Q9NP58 842 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CETPP11597 493 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CYP2C19P33261 490 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 PAK1Q13153 545 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CC2D1AQ6P1N0 951 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 UTP11Q9Y3A2 253 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 TM4SF1P30408 202 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 HACE1Q8IYU2 909 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 OR8K1Q8NGG5 319 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 TRIM6Q9C030 488 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CHUKO15111 745 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 CIB2O75838 187 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 RASIP1Q5U651 963 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 MYSM1Q5VVJ2 828 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 USP50Q70EL3 339 aaPredicted RBP12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 RAB3IL1Q8TBN0 382 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
NPC1L1-201ENST00000289547 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 GOLGA8HP0CJ92 632 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 ATP5DP30049 168 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 SPP2Q13103 211 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF174Q15697 407 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 FAM160B1Q5W0V3 765 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 SEPT14Q6ZU15 432 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 OSBPL5Q9H0X9 879 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 LUC7L3O95232 432 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 DPCR1Q3MIW9 517 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 KCTD1Q719H9 257 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 PTF1AQ7RTS3 328 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 SYT17Q9BSW7 474 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 HAUS4Q9H6D7 363 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 PTH1RQ03431 593 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 DIS3L2Q8IYB7 885 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 RASEFQ8IZ41 740 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.419e-7■□□□□ 10
NPC1L1-201ENST00000289547 STAMQ92783 540 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 ARHGEF35A5YM69 484 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 GAS7O60861 476 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 NDUFA8P51970 172 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 CXCL9Q07325 125 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 CEP128Q6ZU80 1094 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 TAOK1Q7L7X3 1001 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 SRLQ86TD4 932 aa12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 NUP58Q9BVL2 599 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms