RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GH1P01241 217 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 MMP3P08254 477 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 DNAJB2P25686 324 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 PBX2P40425 430 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 SART3Q15020 963 aaKnown RBP11.07□□□□□ -0.64
HMHB1-201ENST00000289448 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
HMHB1-201ENST00000289448 NFRKBQ6P4R8 1299 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 CATIPQ7Z7H3 387 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 MYLIPQ8WY64 445 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 KAT2BQ92831 832 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
HMHB1-201ENST00000289448 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
HMHB1-201ENST00000289448 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
HMHB1-201ENST00000289448 TRANK1O15050 2925 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 MYH6P13533 1939 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 SH2B2O14492 632 aaPredicted RBP11.06□□□□□ -0.64
HMHB1-201ENST00000289448 KPNA6O60684 536 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 FGBP02675 491 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 MYCLP12524 364 aaPredicted RBP11.06□□□□□ -0.64
HMHB1-201ENST00000289448 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 SP2Q02086 613 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 GRIN2CQ14957 1233 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 PGM5Q15124 567 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 NECTIN1Q15223 517 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 FAM47CQ5HY64 1035 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 CREB3L3Q68CJ9 461 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
HMHB1-201ENST00000289448 OTOP2Q7RTS6 562 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
HMHB1-201ENST00000289448 PBX4Q9BYU1 374 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 BCAS3Q9H6U6 928 aa11.06□□□□□ -0.64
HMHB1-201ENST00000289448 MAP3K20Q9NYL2 800 aaKnown RBP11.06□□□□□ -0.64
HMHB1-201ENST00000289448 GCOM1H8Y6P7 765 aaPredicted RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 SORBS3O60504 671 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 DDAH1O94760 285 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 POLR2MP0CAP2 368 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 RXRAP19793 462 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 GDF6Q6KF10 455 aaPredicted RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 RAB11FIP4Q86YS3 637 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
HMHB1-201ENST00000289448 TIFAQ96CG3 184 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 LRRC2Q9BYS8 371 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 MRVI1Q9Y6F6 885 aa11.05□□□□□ -0.64
HMHB1-201ENST00000289448 REV3LO60673 3130 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 MUC3AQ02505 3323 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 HOXD8P13378 290 aaPredicted RBP11.04□□□□□ -0.64
HMHB1-201ENST00000289448 MCM5P33992 734 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
HMHB1-201ENST00000289448 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
HMHB1-201ENST00000289448 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 CASC1Q6TDU7 716 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 DEFB128Q7Z7B8 93 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 DHX37Q8IY37 1157 aaKnown RBP11.04□□□□□ -0.64
HMHB1-201ENST00000289448 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
HMHB1-201ENST00000289448 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 ZNF576Q9H609 170 aa11.04□□□□□ -0.64
HMHB1-201ENST00000289448 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 XIRP2A4UGR9 3374 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 hCG_1642624A0A1W2PR95 340 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 FOSL2P15408 326 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 CASTP20810 708 aaKnown RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 UBA1P22314 1058 aaKnown RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 CCND2P30279 289 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 LIFRP42702 1097 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 RABGGTBP53611 331 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 HIC1Q14526 733 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 GPNMBQ14956 572 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 PTGISQ16647 500 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 DGKDQ16760 1214 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 USP17L6PQ6QN14 398 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 NFXL1Q6ZNB6 911 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 SESTD1Q86VW0 696 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 RRP36Q96EU6 259 aaKnown RBP11.03□□□□□ -0.64
HMHB1-201ENST00000289448 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
HMHB1-201ENST00000289448 YBX2Q9Y2T7 364 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms