RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 FNBP1Q96RU3 617 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 USP40Q9NVE5 1235 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 STOML1Q9UBI4 398 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 ARHGAP42A6NI28 874 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 NR1H3Q13133 447 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 RESP18Q5W5W9 173 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 PPRC1Q5VV67 1664 aaKnown RBP19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 SH2B2O14492 632 aaPredicted RBP19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 ENC1O14682 589 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 CRKLP46109 303 aaKnown RBP19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 CCDC89Q8N998 374 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 TRIM11Q96F44 468 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 ZBTB1Q9Y2K1 713 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 SOS2Q07890 1332 aaPredicted RBP19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 USP31Q70CQ4 1352 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 FRMD3A2A2Y4 597 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 SERPING1P05155 500 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 EHHADHQ08426 723 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 PTGDRQ13258 359 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 XDHP47989 1333 aa19.06■□□□□ 0.64
PCDHA13-201ENST00000289272 ARHGEF35A5YM69 484 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 TOB2Q14106 344 aaPredicted RBP19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 TTC19Q6DKK2 380 aaPredicted RBP19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 PALM2Q8IXS6 379 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 ACRBPQ8NEB7 543 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 MEFVO15553 781 aaPredicted RBP19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 ESRRGP62508 458 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 NLRP7Q8WX94 980 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 OLFM3Q96PB7 478 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 NCAPH2Q6IBW4 605 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 FAM81BQ96LP2 452 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 PCDHA13Q9Y5I0 950 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 IQSEC2Q5JU85 1478 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 RNF8O76064 485 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 RASSF7Q02833 373 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 PSMD2Q13200 908 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 NLRP10Q86W26 655 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 TEX9Q8N6V9 391 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 ZDHHC9Q9Y397 364 aa19.05■□□□□ 0.64
PCDHA13-201ENST00000289272 DHX9Q08211 1270 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 HNRNPCL1O60812 293 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 BAG2O95816 211 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 GGCXP38435 758 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 PSMD1Q99460 953 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 POLR2FP61218 127 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 GTF2IP78347 998 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 MKRN3Q13064 507 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 NLRP14Q86W24 1093 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 RAB20Q9NX57 234 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 IFNAR1P17181 557 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 PI16Q6UXB8 463 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 C3orf20Q8ND61 904 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 BIN2Q9UBW5 565 aaPredicted RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 ZBTB21Q9ULJ3 1066 aa19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 NOVA2Q9UNW9 492 aaKnown RBP19.04■□□□□ 0.64
PCDHA13-201ENST00000289272 YWHAEP62258 255 aaKnown RBP19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 FMO2Q99518 471 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 CCDC68Q9H2F9 335 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 PODXLO00592 558 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 RASGRF2O14827 1237 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 CCNE1P24864 410 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 CORO7P57737 925 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 GRAMD1AQ96CP6 724 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 KCNF1Q9H3M0 494 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 EXOC3O60645 756 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 ZWINTO95229 277 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 TCP11X2Q5H9J9 407 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 FMR1NBQ8N0W7 255 aaPredicted RBP19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 HAUS8Q9BT25 410 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 QTRT2Q9H974 415 aaKnown RBP19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 CAMSAP1Q5T5Y3 1602 aa19.03■□□□□ 0.64
PCDHA13-201ENST00000289272 KLRF2D3W0D1 207 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 CHMP2AO43633 222 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 BBOX1O75936 387 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 CAPRIN2Q6IMN6 1127 aaKnown RBP19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 HAUS1Q96CS2 278 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 ZMYND12Q9H0C1 365 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 RASSF10A6NK89 507 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 MMP1P03956 469 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 NEK8Q86SG6 692 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 MB21D1Q8N884 522 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 OSBPL9Q96SU4 736 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 MOV10L1Q9BXT6 1211 aaKnown RBP19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 MIS12Q9H081 205 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 SLC5A4Q9NY91 659 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 LIFRP42702 1097 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 SLC20A2Q08357 652 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 ARL6IP4Q66PJ3 421 aaKnown RBP19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 NLRX1Q86UT6 975 aa19.02■□□□□ 0.64
PCDHA13-201ENST00000289272 GSDMBQ8TAX9 411 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms