RNA–Protein interactions for RNA: ENST00000286758.4

CXCL13-201, Transcript of C-X-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL13, Length 1,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-201ENST00000286758 LRCH3Q96II8 777 aa11.95□□□□□ -0.5
CXCL13-201ENST00000286758 NSRP1Q9H0G5 558 aaKnown RBP11.95□□□□□ -0.5
CXCL13-201ENST00000286758 ALDH8A1Q9H2A2 487 aaPredicted RBP11.95□□□□□ -0.5
CXCL13-201ENST00000286758 METTL14Q9HCE5 456 aaKnown RBP11.95□□□□□ -0.5
CXCL13-201ENST00000286758 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
CXCL13-201ENST00000286758 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
CXCL13-201ENST00000286758 SPO11Q9Y5K1 396 aa11.95□□□□□ -0.5
CXCL13-201ENST00000286758 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
CXCL13-201ENST00000286758 BCL9O00512 1426 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 CDC42BPBQ9Y5S2 1711 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 JCADQ9P266 1359 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 MROH7Q68CQ1 1323 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 MATN2O00339 956 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 CETN3O15182 167 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 ASAP2O43150 1006 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 HSPA8P11142 646 aaKnown RBP11.94□□□□□ -0.5
CXCL13-201ENST00000286758 VAV2P52735 878 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 PTK7Q13308 1070 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 TUBA3CQ13748 450 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 SPCS2Q15005 226 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
CXCL13-201ENST00000286758 OR52E8Q6IFG1 317 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 ZNF662Q6ZS27 426 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 RASGRP2Q7LDG7 609 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 ZNF572Q7Z3I7 529 aaPredicted RBP11.94□□□□□ -0.5
CXCL13-201ENST00000286758 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 USP6NLQ92738 828 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 ATP6V1G3Q96LB4 118 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 KRT23Q9C075 422 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
CXCL13-201ENST00000286758 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 SLAIN2Q9P270 581 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 HERC5Q9UII4 1024 aaKnown RBP11.94□□□□□ -0.5
CXCL13-201ENST00000286758 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 EFR3BQ9Y2G0 817 aa11.94□□□□□ -0.5
CXCL13-201ENST00000286758 MAGI3Q5TCQ9 1506 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 A0A1B0GVG6 124 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ANO9A1A5B4 782 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 FAM25EA8MYX2 175 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 IDH3BO43837 385 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 AKR1B10O60218 316 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 SH3BP5O60239 455 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 TACC1O75410 805 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 SERPINC1P01008 464 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ALDH2P05091 517 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 NAT2P11245 290 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ATICP31939 592 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 MATR3P43243 847 aaKnown RBP eCLIP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ZNF132P52740 706 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 USP46P62068 366 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 AMPD2Q01433 879 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 MYL5Q02045 173 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 CYLC2Q14093 348 aaPredicted RBP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
CXCL13-201ENST00000286758 DRC3Q9H069 523 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 EPB41L1Q9H4G0 881 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 ANO2Q9NQ90 1003 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 COMMD10Q9Y6G5 202 aa11.93□□□□□ -0.5
CXCL13-201ENST00000286758 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 SMIM31A0A1B0GVY4 71 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 ATP5HO75947 161 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 ASLP04424 464 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 CHGBP05060 677 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 MYCLP1P12525 358 aaPredicted RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 FECHP22830 423 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 CCNCP24863 283 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 HSPA9P38646 679 aaKnown RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 POU5F1Q01860 360 aaKnown RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 FXNQ16595 210 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 ZNF569Q5MCW4 686 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 FKBP15Q5T1M5 1219 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 AGBL2Q5U5Z8 902 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 DAB2IPQ5VWQ8 1189 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 NXNQ6DKJ4 435 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 TRAPPC11Q7Z392 1133 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 LSMEM2Q8N112 164 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 EPSTI1Q96J88 318 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 RNPC3Q96LT9 517 aaKnown RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 SAMSN1Q9NSI8 373 aaKnown RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 DSEQ9UL01 958 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
CXCL13-201ENST00000286758 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.92□□□□□ -0.5
CXCL13-201ENST00000286758 WDR17Q8IZU2 1322 aa11.91□□□□□ -0.5
CXCL13-201ENST00000286758 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms