RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FKBP15Q5T1M5 1219 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
SKA1-201ENST00000285116 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
SKA1-201ENST00000285116 CAPZA3Q96KX2 299 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 LACRTQ9GZZ8 138 aa11.5□□□□□ -0.57
SKA1-201ENST00000285116 RBAK-RBAKDNI3L0D1 243 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 KIAA0754O94854 1291 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 RPS8P62241 208 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 GSTO1P78417 241 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 NNTQ13423 1086 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 CREG2Q8IUH2 290 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 STAG2Q8N3U4 1231 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.578e-6■■■□□ 18.6
SKA1-201ENST00000285116 MAPK8IP1Q9UQF2 711 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 CAPN7Q9Y6W3 813 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 BAZ2BQ9UIF8 2168 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 FSBPO95073 299 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA1-201ENST00000285116 EVX2Q03828 476 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 NONOQ15233 471 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA1-201ENST00000285116 SYN2Q92777 582 aaPredicted RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 EHD4Q9H223 541 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 PP2D1A8MPX8 630 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 SLC26A4O43511 780 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 TACC1O75410 805 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 GNA11P29992 359 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 FNTAP49354 379 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 EHHADHQ08426 723 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 PDE4DQ08499 809 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 PSMD2Q13200 908 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 SPA17Q15506 151 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 INF2Q27J81 1249 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 GLE1Q53GS7 698 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 SND1Q7KZF4 910 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA1-201ENST00000285116 GUF1Q8N442 669 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 OTUD6BQ8N6M0 293 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 GPR101Q96P66 508 aaPredicted RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 NOC4LQ9BVI4 516 aaKnown RBP11.49□□□□□ -0.57
SKA1-201ENST00000285116 ZNF287Q9HBT7 754 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 TSKSQ9UJT2 592 aa11.49□□□□□ -0.57
SKA1-201ENST00000285116 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 SSU72P8A0A1W2PR75 194 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 H0YHG0 523 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 PDE2AO00408 941 aaPredicted RBP11.48□□□□□ -0.57
SKA1-201ENST00000285116 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 ZNF263O14978 683 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 RXRBP28702 533 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MAN2A1Q16706 1144 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 VWA3BQ502W6 1294 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 ALS2CLQ60I27 953 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 UNC13DQ70J99 1090 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 PROM2Q8N271 834 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 RNF10Q8N5U6 811 aaKnown RBP11.48□□□□□ -0.57
SKA1-201ENST00000285116 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 CAVIN3Q969G5 261 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MCM9Q9NXL9 1143 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 IDEP14735 1019 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 PRDX5P30044 214 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 STK4Q13043 487 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 SEPT2Q15019 361 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
SKA1-201ENST00000285116 BARGINQ6ZT62 677 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MICALCLQ6ZW33 695 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 NEK8Q86SG6 692 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 KIAA0895Q8NCT3 520 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MTMR9Q96QG7 549 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 NUCKS1Q9H1E3 243 aaKnown RBP11.48□□□□□ -0.57
SKA1-201ENST00000285116 SEMA6BQ9H3T3 888 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 C6orf50Q9HD87 102 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
SKA1-201ENST00000285116 MEFVO15553 781 aaPredicted RBP11.47□□□□□ -0.57
SKA1-201ENST00000285116 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 KLRK1P26718 216 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 MTIF2P46199 727 aaKnown RBP11.47□□□□□ -0.57
SKA1-201ENST00000285116 EMBQ6PCB8 327 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 PIAS4Q8N2W9 510 aaPredicted RBP11.47□□□□□ -0.57
SKA1-201ENST00000285116 RASGRP4Q8TDF6 673 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 RUFY1Q96T51 708 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 ATP8B3O60423 1300 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 ZEB2O60315 1214 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 PDIA5Q14554 519 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
SKA1-201ENST00000285116 HEATR3Q7Z4Q2 680 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 YTHDF3Q7Z739 585 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms