RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 ZNF865P0CJ78 1059 aaPredicted RBP17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 ADCYAP1R1P41586 468 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 GALNT17Q6IS24 598 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 PIK3AP1Q6ZUJ8 805 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 KATNBL1Q9H079 304 aa17.78■□□□□ 0.44
ATP6V1C2-201ENST00000272238 CCDC194A0A1B0GVG4 234 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 FAM205CA6NFA0 338 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 BTBD18B2RXH4 712 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 PTGS1P23219 599 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 MRPS9P82933 396 aaKnown RBP17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 BECN1Q14457 450 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 FBXO18Q8NFZ0 1043 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 DEFB118Q96PH6 123 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 VTA1Q9NP79 307 aa17.77■□□□□ 0.44
ATP6V1C2-201ENST00000272238 LOC102724159A0A0B4J2E5 919 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 M0R2N6 131 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ADCY6O43306 1168 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SORBS3O60504 671 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 AKR1A1P14550 325 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SREBF1P36956 1147 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 PWP2Q15269 919 aaKnown RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TMEM63BQ5T3F8 832 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 GJC2Q5T442 439 aaPredicted RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 VSIG10LQ86VR7 867 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TBCKQ8TEA7 893 aa17.76■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ZNF76P36508 570 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 INF2Q27J81 1249 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 EARS2Q5JPH6 523 aaKnown RBP17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 KRT25Q7Z3Z0 450 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 PKD2L1Q9P0L9 805 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MRVI1Q9Y6F6 885 aa17.75■□□□□ 0.43
ATP6V1C2-201ENST00000272238 CCDC85CA6NKD9 419 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 KIF28PB7ZC32 967 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SEPT4O43236 478 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 EIF3JO75822 258 aaKnown RBP17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TAPT1Q6NXT6 567 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 NRBP1Q9UHY1 535 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 FAM184BQ9ULE4 1060 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 RGS20O76081 388 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ARIH2O95376 493 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TNFAIP2Q03169 654 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 GNPTABQ3T906 1256 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MCTP2Q6DN12 878 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TMEM106CQ9BVX2 250 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 WDR11Q9BZH6 1224 aa17.74■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 RARBP10826 455 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SMPD1P17405 629 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SOX10P56693 466 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TTLL4Q14679 1199 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 LY6KQ17RY6 165 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 LETM2Q2VYF4 491 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SCFD2Q8WU76 684 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 COPS5Q92905 334 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
ATP6V1C2-201ENST00000272238 FAM86B1E9PN63 330 aa17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 FAM86B2P0C5J1 330 aa17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ITGB5P18084 799 aa17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MTMR1Q13613 665 aa17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 XPNPEP3Q9NQH7 507 aa17.72■□□□□ 0.43
ATP6V1C2-201ENST00000272238 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 STAM2O75886 525 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TDP2O95551 362 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 PGK1P00558 417 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 ATP2B1P20020 1258 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 PDCP20941 246 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 TLK2Q86UE8 772 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 FERMT3Q86UX7 667 aa17.71■□□□□ 0.43
ATP6V1C2-201ENST00000272238 MYH15Q9Y2K3 1946 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 FIBPO43427 364 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 MSCO60682 206 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SYT1P21579 422 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 UBA1P22314 1058 aaKnown RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 SP4Q02446 784 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 CEP55Q53EZ4 464 aa17.7■□□□□ 0.42
ATP6V1C2-201ENST00000272238 PRR16Q569H4 304 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms