RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 XKR9Q5GH70 373 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF148Q9UQR1 794 aa14.34□□□□□ -0.11
PRDM16-201ENST00000270722 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-201ENST00000270722 TPD52L2O43399 206 aaKnown RBP14.33□□□□□ -0.11
PRDM16-201ENST00000270722 ZNF500O60304 480 aaPredicted RBP14.33□□□□□ -0.11
PRDM16-201ENST00000270722 FBXO31Q5XUX0 539 aaPredicted RBP14.33□□□□□ -0.11
PRDM16-201ENST00000270722 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 TRIML2Q8N7C3 387 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 PCDHA12Q9UN75 941 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 PASKQ96RG2 1323 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 FAM102BQ5T8I3 360 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 OTUB1Q96FW1 271 aaPredicted RBP14.33□□□□□ -0.11
PRDM16-201ENST00000270722 FAM129AQ9BZQ8 928 aa14.33□□□□□ -0.11
PRDM16-201ENST00000270722 TRAPPC8Q9Y2L5 1435 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 GPAA1O43292 621 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 ALCAMQ13740 583 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 PATL1Q86TB9 770 aaKnown RBP14.33□□□□□ -0.12
PRDM16-201ENST00000270722 ATP10DQ9P241 1426 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 ARHGAP27Q6ZUM4 889 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 AATFQ9NY61 560 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRDM16-201ENST00000270722 SEPT3Q9UH03 358 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 ZYXQ15942 572 aaKnown RBP14.33□□□□□ -0.12
PRDM16-201ENST00000270722 KRT71Q3SY84 523 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 ERVV-2B6SEH9 535 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 POLR2DO15514 142 aaKnown RBP14.33□□□□□ -0.12
PRDM16-201ENST00000270722 YY1P25490 414 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 GANCQ8TET4 914 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 TRIM62Q9BVG3 475 aa14.33□□□□□ -0.12
PRDM16-201ENST00000270722 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
PRDM16-201ENST00000270722 DDX39AO00148 427 aaKnown RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 SART1O43290 800 aaKnown RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 ARL4AP40617 200 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 APBA1Q02410 837 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 SUCLA2Q9P2R7 463 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 RNMTO43148 476 aaKnown RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 KDM2BQ8NHM5 1336 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 SH3GL1Q99961 368 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 ZBED2Q9BTP6 218 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 GAP43P17677 238 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 GIMAP8Q8ND71 665 aaPredicted RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 NESP48681 1621 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 STK25O00506 426 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 MCF2P10911 925 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 ATAD3BQ5T9A4 648 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 RAB42Q8N4Z0 105 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 SPATA5Q8NB90 893 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 NVLO15381 856 aaKnown RBP14.32□□□□□ -0.12
PRDM16-201ENST00000270722 PMLP29590 882 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 NCAPG2Q86XI2 1143 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 GINS4Q9BRT9 223 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 WDR11Q9BZH6 1224 aa14.32□□□□□ -0.12
PRDM16-201ENST00000270722 MYH9P35579 1960 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 SCYL2Q6P3W7 929 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 SUGCTQ9HAC7 445 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 PA2G4Q9UQ80 394 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 ADGRF5Q8IZF2 1346 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 DAB1O75553 588 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 GCFC2P16383 781 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 ADCY8P40145 1251 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 BFSP1Q12934 665 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 RSBN1LQ6PCB5 846 aaPredicted RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 NRDE2Q9H7Z3 1164 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 ABCC10Q5T3U5 1492 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 LRRIQ4A6NIV6 560 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 ICA1Q05084 483 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 PAMP19021 973 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 MIS18BP1Q6P0N0 1132 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 DIS3L2Q8IYB7 885 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 THOC2Q8NI27 1593 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 CCDC151A5D8V7 595 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 K7ENM7 598 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 INHBAP08476 426 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 TRPC1P48995 793 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 FBXW4P57775 412 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 LAMB3Q13751 1172 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 TTC23LQ6PF05 361 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 BICC1Q9H694 974 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 CDV3Q9UKY7 258 aaKnown RBP14.31□□□□□ -0.12
PRDM16-201ENST00000270722 PDE1BQ01064 536 aa14.31□□□□□ -0.12
PRDM16-201ENST00000270722 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms